RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MRPL40Q9NQ50 206 aaKnown RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 DUS2Q9NX74 493 aaKnown RBP25.42■■□□□ 1.66
RAB40C-201ENST00000248139 ZNF225Q9UK10 706 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 NDUFAF1Q9Y375 327 aa25.42■■□□□ 1.66
RAB40C-201ENST00000248139 IQCF5A8MTL0 148 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 CLIC3O95833 236 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 CHRM1P11229 460 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-201ENST00000248139 CALRP27797 417 aaKnown RBP25.41■■□□□ 1.66
RAB40C-201ENST00000248139 HSPA13P48723 471 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 SGSHP51688 502 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 PSAPL1Q6NUJ1 521 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 GLT6D1Q7Z4J2 308 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 TMEM74Q96NL1 305 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 PHF12Q96QT6 1004 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 HEMK1Q9Y5R4 338 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-201ENST00000248139 FGF4P08620 206 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 SLC6A2P23975 617 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 BIRC2Q13490 618 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 CBR4Q8N4T8 237 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 TSPAN14Q8NG11 270 aa25.41■■□□□ 1.66
RAB40C-201ENST00000248139 MTMR11A4FU01 709 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 PAGE3Q5JUK9 113 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 KRT80Q6KB66 452 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 TAS1R1Q7RTX1 841 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 LPCAT1Q8NF37 534 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 TOP1MTQ969P6 601 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 TRIB3Q96RU7 358 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 CCT7Q99832 543 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 F5H5T6 163 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 NDUFS3O75489 264 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 SEC24DO94855 1032 aaPredicted RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 GJB5O95377 273 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 NDST3O95803 873 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 BMP1P13497 986 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 PRKAR2AP13861 404 aaKnown RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 LBPP18428 481 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 CCSAPQ6IQ19 270 aaPredicted RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 TMEM173Q86WV6 379 aaPredicted RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 CARM1Q86X55 608 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 FAM47BQ8NA70 645 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 GPR150Q8NGU9 434 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 FATE1Q969F0 183 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 LRRC58Q96CX6 371 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 EPB41L1Q9H4G0 881 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 OLAHQ9NV23 265 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 HSPA8P11142 646 aaKnown RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 SUOXP51687 545 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 UFM1P61960 85 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 DYNC1I2Q13409 638 aaKnown RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 LINGO4Q6UY18 593 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 SYVN1Q86TM6 617 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 TRIML2Q8N7C3 387 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 STAG3L4Q8TBR4 150 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 FUBP1Q96AE4 644 aaKnown RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 ZFRQ96KR1 1074 aaKnown RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 CCDC68Q9H2F9 335 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 TFB2MQ9H5Q4 396 aaKnown RBP25.4■■□□□ 1.66
RAB40C-201ENST00000248139 SQORQ9Y6N5 450 aa25.4■■□□□ 1.66
RAB40C-201ENST00000248139 IGLV3-27P01718 113 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 ARL1P40616 181 aaPredicted RBP25.39■■□□□ 1.66
RAB40C-201ENST00000248139 GNA12Q03113 381 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 AAK1Q2M2I8 961 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 C18orf21Q32NC0 220 aaPredicted RBP25.39■■□□□ 1.66
RAB40C-201ENST00000248139 RTP2Q5QGT7 225 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 C16orf59Q7L2K0 433 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 EPHX4Q8IUS5 362 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 DENND1CQ8IV53 801 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 KIAA1191Q96A73 305 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 ROPN1LQ96C74 230 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 GKN1Q9NS71 199 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 TAS2R13Q9NYV9 303 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 IL37Q9NZH6 218 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 FKBPLQ9UIM3 349 aa25.39■■□□□ 1.66
RAB40C-201ENST00000248139 CNOT11Q9UKZ1 510 aaKnown RBP25.39■■□□□ 1.66
RAB40C-201ENST00000248139 ASPDHA6ND91 283 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 STAMBPO95630 424 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 PENKP01210 267 aaPredicted RBP25.39■■□□□ 1.65
RAB40C-201ENST00000248139 ZNF140P52738 457 aaPredicted RBP25.39■■□□□ 1.65
RAB40C-201ENST00000248139 PLIN5Q00G26 463 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 LCP2Q13094 533 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 PRSS55Q6UWB4 352 aaPredicted RBP25.39■■□□□ 1.65
RAB40C-201ENST00000248139 EEF1AKMT1Q8WVE0 214 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 HIC2Q96JB3 615 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 OSBPL11Q9BXB4 747 aa25.39■■□□□ 1.65
RAB40C-201ENST00000248139 ZFC3H1O60293 1989 aaKnown RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 DHRS12A0PJE2 317 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 CBX4O00257 560 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 KERAO60938 352 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 PRLP01236 227 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 ATP4BP51164 291 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 HK3P52790 923 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 YBEYP58557 167 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 HACD2Q6Y1H2 254 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 B3GNT6Q6ZMB0 384 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 OR2T11Q8NH01 316 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 RHEBL1Q8TAI7 183 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 CCDC97Q96F63 343 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 EFHD1Q9BUP0 239 aa25.38■■□□□ 1.65
RAB40C-201ENST00000248139 CINPQ9BW66 212 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-201ENST00000248139 NACA2Q9H009 215 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms