RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 UNC50Q53HI1 259 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 TCHHL1Q5QJ38 904 aaPredicted RBP12.65□□□□□ -0.38
SNAI1-201ENST00000244050 IZUMO2Q6UXV1 221 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 OR52K2Q8NGK3 314 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 OR13C4Q8NGS5 318 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 SLC22A17Q8WUG5 538 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 PHF21BQ96EK2 531 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
SNAI1-201ENST00000244050 CDRT15Q96T59 188 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 TCF12Q99081 682 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 AARSD1Q9BTE6 412 aaKnown RBP12.65□□□□□ -0.38
SNAI1-201ENST00000244050 CINPQ9BW66 212 aaPredicted RBP12.65□□□□□ -0.38
SNAI1-201ENST00000244050 LRRC3Q9BY71 257 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 TFB2MQ9H5Q4 396 aaKnown RBP12.65□□□□□ -0.38
SNAI1-201ENST00000244050 TNFRSF12AQ9NP84 129 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 TRAF6Q9Y4K3 522 aa12.65□□□□□ -0.38
SNAI1-201ENST00000244050 TRAV19A0A0A6YYK7 116 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 C5orf67F2Z3F1 127 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 H3BNX3 289 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 UBDO15205 165 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SMIM24O75264 130 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 GJA1P17302 382 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 HERVK_113P63132 956 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ZXDBP98169 803 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 CDC16Q13042 620 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ART3Q13508 389 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SQLEQ14534 574 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 MAPRE2Q15555 327 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 TAF1AQ15573 450 aaPredicted RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PIM3Q86V86 326 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 GATA6Q92908 595 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PTERQ96BW5 349 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SPON2Q9BUD6 331 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 UBE2ZQ9H832 354 aaPredicted RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 WDR41Q9HAD4 459 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 POLR3BQ9NW08 1133 aaPredicted RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 STOML2Q9UJZ1 356 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ADAMTS6Q9UKP5 1117 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 TBC1D30Q9Y2I9 924 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 MAGEA13PA6NCF6 341 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 UBFD1O14562 309 aaKnown RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PEX1O43933 1283 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 TBL1XO60907 577 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SKAP2O75563 359 aaPredicted RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SUPT7LO94864 414 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PRLP01236 227 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 FGF4P08620 206 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PMLP29590 882 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 IRS1P35568 1242 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PSMD8P48556 350 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ATP4BP51164 291 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PLK1P53350 603 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 STX5Q13190 355 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PTPRCAPQ14761 206 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 CAPRIN2Q6IMN6 1127 aaKnown RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 AFTPHQ6ULP2 937 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PDSS2Q86YH6 399 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 CLYBLQ8N0X4 340 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PPP2R3CQ969Q6 453 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 MARK4Q96L34 752 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 NSMCE3Q96MG7 304 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 TDRD1Q9BXT4 1180 aaKnown RBP12.64□□□□□ -0.39
SNAI1-201ENST00000244050 MUC3BQ9H195 1237 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 VCXQ9H320 206 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SYTL2Q9HCH5 934 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 HCFC1R1Q9NWW0 138 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 SH3BP1Q9Y3L3 701 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 ACTL7AQ9Y615 435 aa12.64□□□□□ -0.39
SNAI1-201ENST00000244050 H0Y626 953 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 GRM6O15303 877 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 GPC4O75487 556 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 RFPL2O75678 378 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 SLC4A1P02730 911 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 RB1P06400 928 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 PIRTP0C851 137 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 MTHFD2P13995 350 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 ME2P23368 584 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 RGRP47804 291 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 SCNN1BP51168 640 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 THOP1P52888 689 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
SNAI1-201ENST00000244050 SLC7A9P82251 487 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 CYTH1Q15438 398 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 UGT3A2Q3SY77 523 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 ZFP1Q6P2D0 407 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 TMEM154Q6P9G4 183 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 ZNF783Q6ZMS7 281 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 Q6ZNB5 142 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 LARP4Q71RC2 724 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNAI1-201ENST00000244050 RAB44Q7Z6P3 723 aaPredicted RBP12.63□□□□□ -0.39
SNAI1-201ENST00000244050 TMEM126BQ8IUX1 230 aa12.63□□□□□ -0.39
SNAI1-201ENST00000244050 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms