RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CD84Q9UIB8 345 aa13.74□□□□□ -0.21
DDX39A-201ENST00000242776 CFAP69A5D8W1 941 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 BTNL10A8MVZ5 291 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 STK17BO94768 372 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 AGFG2O95081 481 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 MAP3K6O95382 1288 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 GNLYP22749 145 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 MAP4P27816 1152 aaKnown RBP13.73□□□□□ -0.21
DDX39A-201ENST00000242776 DEKP35659 375 aaKnown RBP13.73□□□□□ -0.21
DDX39A-201ENST00000242776 RAB15P59190 212 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 CDK3Q00526 305 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 NFATC2Q13469 925 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 IFI16Q16666 785 aaKnown RBP13.73□□□□□ -0.21
DDX39A-201ENST00000242776 HSD11B1LQ7Z5J1 315 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 BMPERQ8N8U9 685 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 NCSTNQ92542 709 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 TRNAU1APQ9NX07 287 aaKnown RBP13.73□□□□□ -0.21
DDX39A-201ENST00000242776 PCDHGC4Q9Y5F7 938 aa13.73□□□□□ -0.21
DDX39A-201ENST00000242776 MYO9AB2RTY4 2548 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 A1L4Q6 167 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 GOLGA6L9A6NEM1 432 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 ARHGAP42A6NI28 874 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 WASH4PA8MWX3 477 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 B4E171 279 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 CAPN5O15484 640 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-201ENST00000242776 EML2O95834 649 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 TSPAN7P41732 249 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 POLR2LP62875 67 aaKnown RBP13.72□□□□□ -0.21
DDX39A-201ENST00000242776 MAMLD1Q13495 774 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 CLPPQ16740 277 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-201ENST00000242776 ZNF662Q6ZS27 426 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 RFLNAQ6ZTI6 216 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 TMEM135Q86UB9 458 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 OR10G6Q8NH81 332 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 SLC37A2Q8TED4 501 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 ECHDC3Q96DC8 303 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 MCEEQ96PE7 176 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 TEX101Q9BY14 249 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 PRKAB1Q9Y478 270 aa13.72□□□□□ -0.21
DDX39A-201ENST00000242776 TRAFD1O14545 582 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-201ENST00000242776 FGF10O15520 208 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-201ENST00000242776 DAPK3O43293 454 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 KATNA1O75449 491 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 CTPS1P17812 591 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 F8A1P23610 371 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 VIPR1P32241 457 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 NOP2P46087 812 aaKnown RBP13.71□□□□□ -0.21
DDX39A-201ENST00000242776 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.21
DDX39A-201ENST00000242776 MC2RQ01718 297 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 TCEAL1Q15170 157 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 CA9Q16790 459 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 CEACAM20Q6UY09 585 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 Q6ZVL8 140 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 TSPAN33Q86UF1 283 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 TP53INP2Q8IXH6 220 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 SLC35G2Q8TBE7 412 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 OR2M4Q96R27 311 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 DHX35Q9H5Z1 703 aaKnown RBP13.71□□□□□ -0.21
DDX39A-201ENST00000242776 ANAPC7Q9UJX3 599 aa13.71□□□□□ -0.21
DDX39A-201ENST00000242776 EEF2KO00418 725 aaKnown RBP13.7□□□□□ -0.22
DDX39A-201ENST00000242776 VPS4BO75351 444 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 MTA2O94776 668 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 HEXIM1O94992 359 aaKnown RBP13.7□□□□□ -0.22
DDX39A-201ENST00000242776 CPP00450 1065 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 FURINP09958 794 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 DLSTP36957 453 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 GPR1P46091 355 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 CSNK1DP48730 415 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 NDST2P52849 883 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 HADHBP55084 474 aaKnown RBP13.7□□□□□ -0.22
DDX39A-201ENST00000242776 RPL7AP62424 266 aaKnown RBP13.7□□□□□ -0.22
DDX39A-201ENST00000242776 ABHD18Q0P651 414 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 ASB18Q6ZVZ8 466 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 DTD2Q96FN9 168 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 ELMO2Q96JJ3 720 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 TEFMQ96QE5 360 aaKnown RBP13.7□□□□□ -0.22
DDX39A-201ENST00000242776 SMIM14Q96QK8 99 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 EFHD1Q9BUP0 239 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 SPRY4Q9C004 299 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 LACRTQ9GZZ8 138 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 VPS4AQ9UN37 437 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 KCNMB2Q9Y691 235 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 RPS6KL1Q9Y6S9 549 aa13.7□□□□□ -0.22
DDX39A-201ENST00000242776 ZNF106Q9H2Y7 1883 aaKnown RBP13.7□□□□□ -0.22
DDX39A-201ENST00000242776 RCCD1A6NED2 376 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 MYO1FO00160 1098 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 INPP4BO15327 924 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 ASMTLO95671 621 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 ZNF28P17035 718 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 LHCGRP22888 699 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 ARHGAP25P42331 645 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 GPLD1P80108 840 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 MC1RQ01726 317 aa13.69□□□□□ -0.22
DDX39A-201ENST00000242776 FOXM1Q08050 763 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms