RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 GALNT2Q10471 571 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 BLMHQ13867 455 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PDE1CQ14123 709 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 TOR2AQ5JU69 321 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 ZNF618Q5T7W0 954 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 TEDDM1Q5T9Z0 273 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 N4BP2L1Q5TBK1 243 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 C6orf163Q5TEZ5 329 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 ARMC3Q5W041 872 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CES4AQ5XG92 561 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 KANK2Q63ZY3 851 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 KCTD11Q693B1 232 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 DSTYKQ6XUX3 929 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 RINLQ6ZS11 566 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 BEND5Q7L4P6 421 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PID1Q7Z2X4 250 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 NET1Q7Z628 596 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 TTC7BQ86TV6 843 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 GLB1L2Q8IW92 636 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 LMNTD2Q8IXW0 634 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 GPATCH11Q8N954 259 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CCNYQ8ND76 341 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 OR6Y1Q8NGX8 325 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PPP4R1Q8TF05 950 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 IRGQQ8WZA9 623 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 MIEF2Q96C03 454 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PGBD4Q96DM1 585 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CDH19Q9H159 772 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 WDR6Q9NNW5 1121 aaKnown RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CASS4Q9NQ75 786 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PIGVQ9NUD9 493 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 SYBUQ9NX95 663 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 NSMCE4AQ9NXX6 385 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 NTMQ9P121 344 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 ZNF212Q9UDV6 495 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 FBXW11Q9UKB1 542 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 CDH9Q9ULB4 789 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 PNMA8BQ9ULN7 279 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-201ENST00000241393 MFHAS1Q9Y4C4 1052 aa7.94□□□□□ -1.14
CXCR4-201ENST00000241393 COL4A4P53420 1690 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 A0A0G2JNJ9 132 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 C17orf102A2RUQ5 167 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 LCHNA4D1U4 455 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 GLTPD2A6NH11 291 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 CAPN9O14815 690 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 TIMM44O43615 452 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 TM7SF2O76062 418 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PSMG1O95456 288 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 FYNP06241 537 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 APOA4P06727 396 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 ERCC2P18074 760 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 RPL9P32969 192 aaKnown RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 HTR7P34969 479 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 SLC1A6P48664 564 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 HARS2P49590 506 aaKnown RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 TKTL1P51854 596 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 LIMK2P53671 638 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 SLC16A1P53985 500 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PRKAA2P54646 552 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 TPI1P60174 286 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PDE1BQ01064 536 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 SLC34A1Q06495 639 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 NAA25Q14CX7 972 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PCLAFQ15004 111 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 CCDC6Q16204 474 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 KHDC1Q4VXA5 237 aaKnown RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 ACSBG2Q5FVE4 666 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PITRM1Q5JRX3 1037 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 RABGAP1LQ5R372 815 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 MBNL2Q5VZF2 373 aaKnown RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 WSCD1Q658N2 575 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 TTC8Q8TAM2 541 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 DNAJC9Q8WXX5 260 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 STMN2Q93045 179 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 FATE1Q969F0 183 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PRR11Q96HE9 360 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 SENP8Q96LD8 212 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PPP1R2P1Q96PQ5 205 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 RBBP8Q99708 897 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 SYT15Q9BQS2 421 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 MED10Q9BTT4 135 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 MAGEB5Q9BZ81 275 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 ULBP1Q9BZM6 244 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 GBA3Q9H227 469 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 CHST12Q9NRB3 414 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 DDX43Q9NXZ2 648 aaKnown RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 KLHL8Q9P2G9 620 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-201ENST00000241393 COPG2Q9UBF2 871 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 Q9UFV3 132 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 VANGL2Q9ULK5 521 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 PLA2G4CQ9UP65 541 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 RPS6KL1Q9Y6S9 549 aa7.93□□□□□ -1.14
CXCR4-201ENST00000241393 CCDC195A0A1B0GUA6 201 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TMEM114B3SHH9 223 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 NVLO15381 856 aaKnown RBP7.92□□□□□ -1.14
CXCR4-201ENST00000241393 TSPAN6O43657 245 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CREB3O43889 395 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CACNG3O60359 315 aa7.92□□□□□ -1.14
CXCR4-201ENST00000241393 CIB2O75838 187 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms