RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 DKK3Q9UBP4 350 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 L1RE1Q9UN81 338 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 TRBC1P01850 177 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 C1orf189Q5VU69 101 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 GALNT13Q8IUC8 556 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 APBB2Q92870 758 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 CHIAQ9BZP6 476 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 ASTN2O75129 1339 aaPredicted RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 LTN1O94822 1766 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 MDM4O15151 490 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 LRIG2O94898 1065 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 ALPPL2P10696 532 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 GZMAP12544 262 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 SLC34A1Q06495 639 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 DPYSL3Q14195 570 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 AADACL2Q6P093 401 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 POLNQ7Z5Q5 900 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 OR6K6Q8NGW6 343 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 PRICKLE1Q96MT3 831 aaPredicted RBP13.17□□□□□ -0.3
NEK9-201ENST00000238616 ZNF224Q9NZL3 707 aa13.17□□□□□ -0.3
NEK9-201ENST00000238616 OTCP00480 354 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 OCLNQ16625 522 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SLC8B1Q6J4K2 584 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 OR4C6Q8NH72 309 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 HTRA1Q92743 480 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SLC25A23Q9BV35 468 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 OR1D2P34982 312 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 ENPEPQ07075 957 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 PUM1Q14671 1186 aaKnown RBP eCLIP13.16□□□□□ -0.3
NEK9-201ENST00000238616 AIF1LQ9BQI0 150 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SPATA31A1Q5TZJ5 1347 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 HSD11B1P28845 292 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 CASRP41180 1078 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 MTTPP55157 894 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 VGLL4Q14135 290 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 NAIF1Q69YI7 327 aaPredicted RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 OR4L1Q8NH43 312 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SHC3Q92529 594 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 IL12RB2Q99665 862 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 RPH3AQ9Y2J0 694 aaPredicted RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 ADAM8P78325 824 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 TMPRSS11AQ6ZMR5 421 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 LIX1Q8N485 282 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 ZNF366Q8N895 744 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 P2RX7Q99572 595 aaKnown RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 COMMD4Q9H0A8 199 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 RIIAD1A6NNX1 92 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 OR1F1O43749 312 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 BANF1O75531 89 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 CTSKP43235 329 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 HJURPQ8NCD3 748 aaPredicted RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 SAP18O00422 153 aaKnown RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 MSCO60682 206 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 LCA5LO95447 670 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 FGBP02675 491 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 CYP3A4P08684 503 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 MAGEA2P43356 314 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 PCID2Q5JVF3 399 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 NUP54Q7Z3B4 507 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 DEFB119Q8N690 84 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 NMUR1Q9HB89 426 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 ACSS2Q9NR19 701 aa13.16□□□□□ -0.3
NEK9-201ENST00000238616 AGO1Q9UL18 857 aaKnown RBP13.16□□□□□ -0.3
NEK9-201ENST00000238616 TLR5O60602 858 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 LAMP2P13473 410 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 RYKP34925 604 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 GPD2P43304 727 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 CORO7P57737 925 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 RAB10P61026 200 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 TGFB2P61812 414 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 SP2Q02086 613 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
NEK9-201ENST00000238616 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 GMCL1P1Q8NEA9 526 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 DGKBQ9Y6T7 804 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 C15orf38-AP3S2A0A0A6YYH1 394 aa13.15□□□□□ -0.3
NEK9-201ENST00000238616 FKTNO75072 461 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms