RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 TEX9Q8N6V9 391 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ACE2Q9BYF1 805 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ABCG8Q9H221 673 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 KCNK13Q9HB14 408 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PARD6AQ9NPB6 346 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TAS2R1Q9NYW7 299 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 XPR1Q9UBH6 696 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ZNF180Q9UJW8 692 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 FBXO5Q9UKT4 447 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ARL5AQ9Y689 179 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 STON1Q9Y6Q2 735 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 GDF9O60383 454 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CFIP05156 583 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ACADMP11310 421 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PTPN4P29074 926 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 SLC1A2P43004 574 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ST8SIA6P61647 398 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 UAP1L1Q3KQV9 507 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PLK5Q496M5 336 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 GALNTL6Q49A17 601 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PCID2Q5JVF3 399 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 C1orf146Q5VVC0 180 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RNF219Q5W0B1 726 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TMEM198Q66K66 360 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 KIAA1211LQ6NV74 962 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ARCQ7LC44 396 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CYP2U1Q7Z449 544 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CCNJLQ8IV13 435 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ZNF276Q8N554 614 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RTL3Q8N8U3 475 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 UTP4Q969X6 686 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 SLC7A6OSQ96CW6 309 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TRIM62Q9BVG3 475 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 DENND2DQ9H6A0 471 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 GPAMQ9HCL2 828 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CEP295Q9C0D2 2601 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ATXN2Q99700 1313 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 NDUFS2O75306 463 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PAPSS2O95340 614 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 C1QAP02745 245 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 SERPINE1P05121 402 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CCDC166P0CW27 439 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TSHRP16473 764 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ITGB6P18564 788 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PAMP19021 973 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 POLR2EP19388 210 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CCNCP24863 283 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 SLC8A1P32418 973 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 MPLP40238 635 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 GRIA4P48058 902 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 RPL34P49207 117 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 SEMA3BQ13214 749 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PCLAFQ15004 111 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 TCHHL1Q5QJ38 904 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 NAPRTQ6XQN6 538 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 MARK2Q7KZI7 788 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 LPCAT2Q7L5N7 544 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PIM3Q86V86 326 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CEP97Q8IW35 865 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 OR13C4Q8NGS5 318 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 SNX19Q92543 992 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ESAMQ96AP7 390 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CATSPER2Q96P56 530 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 GORASP1Q9BQQ3 440 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 CADM1Q9BY67 442 aaKnown RBP8.64□□□□□ -1.03
VPS4B-201ENST00000238497 MIR1-1HGQ9H1L0 117 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 ATP13A1Q9HD20 1204 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 EMCNQ9ULC0 261 aa8.64□□□□□ -1.03
VPS4B-201ENST00000238497 PI4KAP42356 2102 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 TRIM13O60858 407 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 KRT36O76013 467 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SUPT7LO94864 414 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 PROCP04070 461 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 PABPC1P11940 636 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 ABL2P42684 1182 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 IL12RB1P42701 662 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 MAGEA3P43357 314 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SERPINH1P50454 418 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SGSHP51688 502 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 LIMK2P53671 638 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 CLNS1AP54105 237 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 ABCE1P61221 599 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 NIPAL4Q0D2K0 466 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 RCN1Q15293 331 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 TAF11Q15544 211 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 MUM1Q2TAK8 710 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 RALGPS1Q5JS13 557 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 SPDYAQ5MJ70 313 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 BRMS1LQ5PSV4 323 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 C6orf163Q5TEZ5 329 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 TAS2R42Q7RTR8 314 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 DGLUCYQ7Z3D6 616 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 FSTL5Q8N475 847 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 KIAA1958Q8N8K9 716 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 DCBLD1Q8N8Z6 715 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 RBM15BQ8NDT2 890 aaKnown RBP8.63□□□□□ -1.03
VPS4B-201ENST00000238497 LPCAT1Q8NF37 534 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 NELL1Q92832 810 aa8.63□□□□□ -1.03
VPS4B-201ENST00000238497 BTBD10Q9BSF8 475 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms