RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 POU4F1Q01851 419 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 PTPRCAPQ14761 206 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAAH2Q6GMR7 532 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 GATAD2AQ86YP4 633 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 PSMA8Q8TAA3 256 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 KLHL5Q96PQ7 755 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 TP63Q9H3D4 680 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 GSTO2Q9H4Y5 243 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 FANCEQ9HB96 536 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SPAG4Q9NPE6 437 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SCHIP1Q9P0W5 487 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 EGFL7Q9UHF1 273 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CNOT6Q9ULM6 557 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CRYL1Q9Y2S2 319 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 A0A087X1B8 175 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZSCAN5BA6NJL1 495 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 F8W810 466 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 HTRA2O43464 458 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CA12O43570 354 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 NRP2O60462 931 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 GJB3O75712 270 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SIX3O95343 332 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 MYL3P08590 195 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 DDX5P17844 614 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CHRM3P20309 590 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ENDOUP21128 410 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ATP6V1B2P21281 511 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 OPRL1P41146 370 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SQLEQ14534 574 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAM214AQ32MH5 1076 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 FBXO48Q5FWF7 155 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 BORAQ6PGQ7 559 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 LYSMD3Q7Z3D4 306 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCDC103Q8IW40 242 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 RYBPQ8N488 228 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 OR52K2Q8NGK3 314 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 PIF1Q9H611 641 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ENTPD7Q9NQZ7 604 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 DUS2Q9NX74 493 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 MARCH4Q9P2E8 410 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SQORQ9Y6N5 450 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 FNDC1Q4ZHG4 1894 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 TCRBV3S1A0A5B6 114 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PCP4L1A6NKN8 68 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 A8MV72 311 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PSMD3O43242 534 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 THP07101 528 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 LTA4HP09960 611 aaKnown RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TM4SF4P48230 202 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PSMD8P48556 350 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PSEN2P49810 448 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CRYBB1P53674 252 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 GEMP55040 296 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 FOXA1P55317 472 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ITKQ08881 620 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CAMK2BQ13554 666 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 GRB14Q14449 540 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 POLD3Q15054 466 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PCBP1Q15365 356 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 HECTD2Q5U5R9 776 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 KIAA0930Q6ICG6 404 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 LARP4Q71RC2 724 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TFAP2DQ7Z6R9 452 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TLK2Q86UE8 772 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CARM1Q86X55 608 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 IQCF2Q8IXL9 164 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 OR13J1Q8NGT2 312 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 OR6P1Q8NGX9 317 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 UPF3AQ9H1J1 476 aaKnown RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CSNK1G1Q9HCP0 422 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TMEM181Q9P2C4 612 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ERGIC3Q9Y282 383 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ATG2AQ2TAZ0 1938 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 J3KR12 359 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 IRAK2O43187 625 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC4A1P02730 911 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 KRT8P05787 483 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CTSHP09668 335 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 DNAJB2P25686 324 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CASP2P42575 452 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 IST1P53990 364 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 TXNL4AP83876 142 aaKnown RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CREB5Q02930 508 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PRKCQQ04759 706 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 FPGSQ05932 587 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PIGFQ07326 219 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 EIF4EBP2Q13542 120 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 MOGQ16653 247 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 AGAP9Q5VTM2 703 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ANKRD26P1Q6NSI1 321 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 ISCA2Q86U28 154 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 MAGEE2Q8TD90 523 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 CHPT1Q8WUD6 406 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 PTERQ96BW5 349 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 MS4A4AQ96JQ5 239 aa9.36□□□□□ -0.91
HLA-DOA-201ENST00000229829 UBXN10Q96LJ8 280 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms