RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 WASF3Q9UPY6 502 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 DRG1Q9Y295 367 aaKnown RBP12.59□□□□□ -0.39
LSM5-201ENST00000223084 SLC17A4Q9Y2C5 497 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 PLEKHM1Q9Y4G2 1056 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 PCYT1BQ9Y5K3 369 aaPredicted RBP12.59□□□□□ -0.39
LSM5-201ENST00000223084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
LSM5-201ENST00000223084 PTPRBP23467 1997 aa12.59□□□□□ -0.39
LSM5-201ENST00000223084 MYLKQ15746 1914 aa12.58□□□□□ -0.39
LSM5-201ENST00000223084 SPEGQ15772 3267 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 ZNF185O15231 689 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 GPR39O43194 453 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 RFPL3O75679 317 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 AP2A1O95782 977 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 IVLP07476 585 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
LSM5-201ENST00000223084 CA5AP35218 305 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
LSM5-201ENST00000223084 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
LSM5-201ENST00000223084 FAM151BQ6UXP7 276 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 MICALCLQ6ZW33 695 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 GKN2Q86XP6 184 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 NRROSQ86YC3 692 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 SFTPA2Q8IWL1 248 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 SLC35F3Q8IY50 421 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 C17orf53Q8N3J3 647 aaPredicted RBP12.58□□□□□ -0.4
LSM5-201ENST00000223084 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 TRAM1L1Q8N609 369 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 CCDC89Q8N998 374 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 ADAMTS14Q8WXS8 1223 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 SCARF2Q96GP6 870 aaPredicted RBP12.58□□□□□ -0.4
LSM5-201ENST00000223084 SCNM1Q9BWG6 230 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 BOCQ9BWV1 1114 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 CDH19Q9H159 772 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 LRRC40Q9H9A6 602 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 IL26Q9NPH9 171 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 NFKBIL1Q9UBC1 381 aaPredicted RBP12.58□□□□□ -0.4
LSM5-201ENST00000223084 GULP1Q9UBP9 304 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 KLK13Q9UKR3 277 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 TMPRSS11EQ9UL52 423 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 GPR34Q9UPC5 381 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 PRKAB1Q9Y478 270 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 ST14Q9Y5Y6 855 aa12.58□□□□□ -0.4
LSM5-201ENST00000223084 PLXNB3Q9ULL4 1909 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 CPED1A4D0V7 1026 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 GAPDHSO14556 408 aaPredicted RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 STX7O15400 261 aaKnown RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 PSMD3O43242 534 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A9O60656 530 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 DNAJC6O75061 913 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 MTX2O75431 263 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 SLC25A14O95258 325 aaPredicted RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 TRIM16O95361 564 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 CKMT1AP12532 417 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A6P19224 532 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 LPOP22079 712 aaPredicted RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A1P22309 533 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A4P22310 534 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ACP1P24666 158 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A3P35503 534 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A5P35504 534 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ACTN2P35609 894 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 FDFT1P37268 417 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 SPAM1P38567 509 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ADCY8P40145 1251 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 GNG11P61952 73 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 TMPRSS15P98073 1019 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 CTBSQ01459 385 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 NR0B2Q15466 257 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 TAF1AQ15573 450 aaPredicted RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 CHRNA6Q15825 494 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ATP13A5Q4VNC0 1218 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 KHDC1Q4VXA5 237 aaKnown RBP12.57□□□□□ -0.4
LSM5-201ENST00000223084 PYCR3Q53H96 274 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 C6orf132Q5T0Z8 1188 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 GUSBP11Q6P575 273 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 GSTA5Q7RTV2 222 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 KYQ8NBH2 561 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 FAM46DQ8NEK8 389 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 OR4K2Q8NGD2 314 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 OR52K1Q8NGK4 314 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 GLYATL1Q969I3 302 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 LRRC45Q96CN5 670 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 PLEKHG4BQ96PX9 1271 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 OR2M4Q96R27 311 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ZSCAN5AQ9BUG6 496 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 OR2AG1Q9H205 316 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A7Q9HAW7 530 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A10Q9HAW8 530 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 UGT1A8Q9HAW9 530 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ARNT2Q9HBZ2 717 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 RAB6BQ9NRW1 208 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
LSM5-201ENST00000223084 ATXN10Q9UBB4 475 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ZNHIT2Q9UHR6 403 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 FKBPLQ9UIM3 349 aa12.57□□□□□ -0.4
LSM5-201ENST00000223084 ANGPTL2Q9UKU9 493 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms