RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NR1H2P55055 460 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 C21orf59P57076 290 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 MPP1Q00013 466 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 TOP3AQ13472 1001 aaPredicted RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 TRIQKQ629K1 86 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 FSTL4Q6MZW2 842 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 HEATR4Q86WZ0 1026 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 PQLC1Q8N2U9 271 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 OR2T12Q8NG77 320 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 SLC35B2Q8TB61 432 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 MCRS1Q96EZ8 462 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ITCHQ96J02 903 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 POLR1BQ9H9Y6 1135 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ACSS2Q9NR19 701 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 FBXL21Q9UKT6 434 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 CORO2BQ9UQ03 480 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 LYVE1Q9Y5Y7 322 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 TK2O00142 265 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 GRM6O15303 877 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 STK16O75716 305 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ADH1CP00326 375 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 CFHP08603 1231 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 WARSP23381 471 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 BIKQ13323 160 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 GSTA3Q16772 222 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 CRTC3Q6UUV7 619 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 RTL3Q8N8U3 475 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 DBF4BQ8NFT6 615 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 APOLD1Q96LR9 279 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 GATA5Q9BWX5 397 aaPredicted RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ATP6V1HQ9UI12 483 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 POLR1DQ9Y2S0 133 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 POLR3HQ9Y535 204 aaPredicted RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 TIMM22Q9Y584 194 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 TNRC6CQ9HCJ0 1690 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 EFCAB10A6NFE3 127 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ENO2P09104 434 aaPredicted RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 ATXN1P54253 815 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 ZNHIT3Q15649 155 aaPredicted RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 BROXQ5VW32 411 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 PLPP4Q5VZY2 271 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ARMC8Q8IUR7 673 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 RELL1Q8IUW5 271 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 KBTBD2Q8IY47 623 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 TMEM174Q8WUU8 243 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 HDHD2Q9H0R4 259 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 FBXW11Q9UKB1 542 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 STBD1O95210 358 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 OR6A2O95222 327 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 IFNA16P05015 189 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 ALOX12P18054 663 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 PPIBP23284 216 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 SLC18A1P54219 525 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 SMIM11AP58511 58 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 RAB14P61106 215 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 TRIM71Q2Q1W2 868 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 GK5Q6ZS86 529 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 C16orf62Q7Z3J2 963 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 CPSF7Q8N684 471 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 POP5Q969H6 163 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 C19orf60Q96EN9 201 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 PPM1MQ96MI6 270 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 OSBPL11Q9BXB4 747 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 REXO4Q9GZR2 422 aaKnown RBP11.47□□□□□ -0.57
NOD1-201ENST00000222823 HMG20AQ9NP66 347 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 PSMD13Q9UNM6 376 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 SLC27A6Q9Y2P4 619 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 SNX10Q9Y5X0 201 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 AP4B1Q9Y6B7 739 aa11.47□□□□□ -0.57
NOD1-201ENST00000222823 NPEPPSL1A6NEC2 478 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 URADA6NGE7 173 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 BBIP1A8MTZ0 92 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 ZW10O43264 779 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 SIN3BO75182 1162 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 PAX7P23759 505 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 ASPAP45381 313 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 GDF10P55107 478 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 NRG1Q02297 640 aaPredicted RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 SH3PXD2AQ5TCZ1 1133 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 ZNF697Q5TEC3 545 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 TMEM192Q8IY95 271 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 DCBLD1Q8N8Z6 715 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 POMGNT2Q8NAT1 580 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 SLC9A8Q9Y2E8 581 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 KPNA4O00629 521 aaPredicted RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 ITPKAP23677 461 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 PTSQ03393 145 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 SLC9A5Q14940 896 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 CA9Q16790 459 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 NOL9Q5SY16 702 aaKnown RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 CAPN13Q6MZZ7 669 aaPredicted RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 TRMT10BQ6PF06 316 aaKnown RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 HPS6Q86YV9 775 aa11.46□□□□□ -0.57
NOD1-201ENST00000222823 RAVER1Q8IY67 606 aaKnown RBP11.46□□□□□ -0.57
NOD1-201ENST00000222823 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.46□□□□□ -0.57
NOD1-201ENST00000222823 BEND7Q8N7W2 519 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms