RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 FBXL20Q96IG2 436 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 ADAM2Q99965 735 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 SLC52A3Q9NQ40 469 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 ABI2Q9NYB9 513 aaPredicted RBP17.19■□□□□ 0.34
USB1-201ENST00000219281 TIMM22Q9Y584 194 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 SUPT3HB4E1H0 165 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 INPP4BO15327 924 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 SUPT3HO75486 399 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 NCK1P16333 377 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 GPR15P49685 360 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 CTBSQ01459 385 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 CLCQ05315 142 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 NFYCQ13952 458 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 GALNT3Q14435 633 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 FUT11Q495W5 492 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 ZBED5Q49AG3 693 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 RABL3Q5HYI8 236 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 MSANTD2Q6P1R3 559 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 CIR1Q86X95 450 aaPredicted RBP17.19■□□□□ 0.34
USB1-201ENST00000219281 RHEBL1Q8TAI7 183 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 FATE1Q969F0 183 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 IGSF8Q969P0 613 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 TMEM125Q96AQ2 219 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 ISOC1Q96CN7 298 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 SEMA3CQ99985 751 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 TFB2MQ9H5Q4 396 aaKnown RBP17.19■□□□□ 0.34
USB1-201ENST00000219281 TRIM64CA6NLI5 447 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 ACOX3O15254 700 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 CRCPO75575 148 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 IDO1P14902 403 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 SUOXP51687 545 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 ACVR1Q04771 509 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 DCP1BQ8IZD4 617 aaKnown RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 TRPV3Q8NET8 790 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 ABTB1Q969K4 478 aaPredicted RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 TEX37Q96LM6 180 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 CATSPERZQ9NTU4 200 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 PTBP2Q9UKA9 531 aaKnown RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 GPR45Q9Y5Y3 372 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 TTC3P53804 2025 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 RPP40O75818 363 aaKnown RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 RASAL1O95294 804 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 GSK3BP49841 420 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 EFEMP1Q12805 493 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 TUSC3Q13454 348 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 DDR2Q16832 855 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 RAP1GAP2Q684P5 730 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 SPRED1Q7Z699 444 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 FBXO39Q8N4B4 442 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 GOLM1Q8NBJ4 401 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 GPR150Q8NGU9 434 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 C12orf43Q96C57 262 aaKnown RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 AARSD1Q9BTE6 412 aaKnown RBP17.18■□□□□ 0.34
USB1-201ENST00000219281 ALG2Q9H553 416 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 IKZF3Q9UKT9 509 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 RNF112Q9ULX5 631 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 GMEB1Q9Y692 573 aa17.18■□□□□ 0.34
USB1-201ENST00000219281 UBA6A0AVT1 1052 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 EI24O14681 340 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 MUSKO15146 869 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 CLOCKO15516 846 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 BAIAP3O94812 1187 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 CES1P23141 567 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 NUP107P57740 925 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 YWHAHQ04917 246 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 LCP2Q13094 533 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 POLD3Q15054 466 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 PAGE3Q5JUK9 113 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 FBXL22Q6P050 247 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 KLHL35Q6PF15 583 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 PAQR3Q6TCH7 311 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 GPR180Q86V85 440 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 MON1AQ86VX9 555 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 OFCC1Q8IZS5 231 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 OR4L1Q8NH43 312 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 HSPBAP1Q96EW2 488 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 SUSD3Q96L08 255 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 DCUN1D5Q9BTE7 237 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 NPLQ9BXD5 320 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 CDC14AQ9UNH5 594 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 FAF1Q9UNN5 650 aaPredicted RBP17.17■□□□□ 0.34
USB1-201ENST00000219281 FAM50BQ9Y247 325 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 A0A1W2PP18 115 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 ASPDHA6ND91 283 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 RHOBTB1O94844 696 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 TBX18O95935 607 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 GPIP06744 558 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 FMO4P31512 558 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 CASP2P42575 452 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 KCNK10P57789 538 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 LIPEQ05469 1076 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 FOXM1Q08050 763 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 SCIMPQ6UWF3 145 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 STAG3L4Q8TBR4 150 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 ADAMTS16Q8TE57 1224 aa17.17■□□□□ 0.34
USB1-201ENST00000219281 LZICQ8WZA0 190 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms