RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PIP5K1CO60331 668 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 PRKAR1AP10644 381 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 SSR2P43308 183 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 ITGB3BPQ13352 177 aaPredicted RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 IDNKQ5T6J7 187 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 IL23RQ5VWK5 629 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 ZZZ3Q8IYH5 903 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 SPATA4Q8NEY3 305 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 UBASH3BQ8TF42 649 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 BPIFA3Q9BQP9 254 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 FDXACB1Q9BRP7 624 aaPredicted RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 TAF1DQ9H5J8 278 aaPredicted RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 TRHDEQ9UKU6 1024 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 VANGL2Q9ULK5 521 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 BAIAP2Q9UQB8 552 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 GNEQ9Y223 722 aaKnown RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 A0A1W2PQ45 241 aaPredicted RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 A0A1W2PQY0 241 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 OXSR1O95747 527 aaPredicted RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 FSHRP23945 695 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 S100A2P29034 98 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 NME5P56597 212 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 SLC20A2Q08357 652 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 KCNA10Q16322 511 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 STXBP5Q5T5C0 1151 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 FAM92BQ6ZTR7 304 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 LENG8Q96PV6 779 aaPredicted RBP3.44□□□□□ -1.86
NEB-201ENST00000172853 SLC6A15Q9H2J7 730 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 CRISPLD1Q9H336 500 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 MTMR10Q9NXD2 777 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 GTF3C4Q9UKN8 822 aa3.44□□□□□ -1.86
NEB-201ENST00000172853 ARP10275 920 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 SLC6A9P48067 706 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 MANEAQ5SRI9 462 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 SLC35F1Q5T1Q4 408 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 GARNL3Q5VVW2 1013 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 SLC27A1Q6PCB7 646 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ASB18Q6ZVZ8 466 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ABHD13Q7L211 337 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ABHD12BQ7Z5M8 362 aaPredicted RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 WDSUB1Q8N9V3 476 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEB-201ENST00000172853 NUDT9Q9BW91 350 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 FN3KQ9H479 309 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 JMJD4Q9H9V9 463 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 FAM153AQ9UHL3 310 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ACTL7BQ9Y614 415 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CSF2P04141 144 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 MANFP55145 182 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 OTUD4Q01804 1114 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 EFR3AQ14156 821 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 TRAPPC6BQ86SZ2 158 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 MREGQ8N565 214 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CPB2Q96IY4 423 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ZNF639Q9UID6 485 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CA5BQ9Y2D0 317 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 RPS6KL1Q9Y6S9 549 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 USP31Q70CQ4 1352 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 TTC26A0AVF1 554 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 LAMP2P13473 410 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 MSR1P21757 451 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 RPL10P27635 214 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 GSTM2P28161 218 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ZNF41P51814 821 aaPredicted RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 CDH4P55283 916 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CAP1Q01518 475 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 GNA12Q03113 381 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 DBPQ10586 325 aaPredicted RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 PCBP1Q15365 356 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEB-201ENST00000172853 DHX40Q8IX18 779 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 GPC2Q8N158 579 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ZNF610Q8N9Z0 462 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 WFIKKN2Q8TEU8 576 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 OSMRQ99650 979 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CERS4Q9HA82 394 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 KCND1Q9NSA2 647 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CNOT11Q9UKZ1 510 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 CPS1P31327 1500 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 TRBV23OR9-2A0A075B6M9 112 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 SH3PXD2BA1X283 911 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 HAT1O14929 419 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 DGKIO75912 1065 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CYP11A1P05108 521 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 DDX6P26196 483 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEB-201ENST00000172853 STOMP27105 288 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 NFE2L1Q14494 772 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CHI3L2Q15782 390 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 BORAQ6PGQ7 559 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 CYP2U1Q7Z449 544 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 EGFL6Q8IUX8 553 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 SIDT2Q8NBJ9 832 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 MSI2Q96DH6 328 aaKnown RBP3.43□□□□□ -1.86
NEB-201ENST00000172853 SGF29Q96ES7 293 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 ASPNQ9BXN1 380 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 PLEKHA3Q9HB20 300 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 PCDHA7Q9UN72 937 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 PTPRJQ12913 1337 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 A8MU76 341 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 GHRHRQ02643 423 aa3.43□□□□□ -1.86
NEB-201ENST00000172853 FSTL1Q12841 308 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms