RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 AnpepP97449 966 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Plpp4Q0VBU9 271 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cd300lgQ1ERP8 331 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Treml2Q2LA85 329 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Brms1lQ3U1T3 323 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Slc22a23Q3UHH2 689 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ccdc17Q8CE13 565 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Slc35b2Q91ZN5 431 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 PclafQ9CQX4 110 aaKnown RBP18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 ApipQ9WVQ5 241 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Slfn2Q9Z0I6 378 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gria3Q9Z2W9 888 aa18.25■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr671A0A1B0GSN5 317 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn1r2A2AMT6 306 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ism1A2ATD1 454 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn2r24D3YUI0 854 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn2r14E9Q759 848 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Il12bP43432 335 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Lim2P56563 173 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Trappc9Q3U0M1 1148 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nat9Q3UG98 241 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rab26Q504M8 260 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Grxcr1Q50H32 290 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tecpr1Q80VP0 1166 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ccdc32Q8BS39 179 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 4932414N04RikQ8CEQ9 752 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 GrpQ8R1I2 146 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Lrrc40Q9CRC8 602 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dlgap1Q9D415 992 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 CrotQ9DC50 612 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 NckipsdQ9ESJ4 714 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nrf1Q9WU00 503 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Smarcb1Q9Z0H3 385 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sept5Q9Z2Q6 369 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ccdc62E9PVD1 701 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zbtb10E9Q8X5 861 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Vmn2r67K7N6T2 851 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 LatO54957 242 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Znf106O88466 1888 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Got2P05202 430 aaKnown RBP18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Apoa4P06728 395 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Wnt6P22727 364 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Hddc2Q3SXD3 199 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cmpk2Q3U5Q7 447 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Adora2aQ60613 410 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cntn2Q61330 1040 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dnajc1Q61712 552 aaKnown RBP18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Letm2Q7TNU7 480 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Slc38a9Q8BGD6 560 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rbm22Q8BHS3 420 aaKnown RBP18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pdcd2lQ8C5N5 364 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 TbcelQ8C5W3 424 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Abhd11Q8K4F5 307 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Mrps2Q924T2 291 aaKnown RBP18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Slc13a2Q9ES88 586 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pik3cgQ9JHG7 1102 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Grb14Q9JLM9 538 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 Racgap1Q9WVM1 628 aa18.24■□□□□ 0.51
Trim47-202ENSMUST00000106441 PcntP48725 2898 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nup210Q9QY81 1886 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm5483B2RV77 97 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gm8257E9Q8R3 264 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pcsk6F6XJP7 959 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gp5O08742 567 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Il4i1O09046 630 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ccl5P30882 91 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Cd9P40240 226 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Apobec1P51908 229 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Htr4P97288 388 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Gbp10Q000W5 611 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rpp38Q80UU2 280 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ttc34Q8C0Q3 554 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ipo13Q8K0C1 963 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Dennd2dQ91VV4 469 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Q922M7 232 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Npffr2Q924H0 417 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zdhhc13Q9CWU2 622 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pinx1Q9CZX5 332 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 CinpQ9D0V8 212 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Rsph14Q9D3W1 341 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Q9D4A5 307 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tnfaip8l2Q9D8Y7 184 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 EtfbQ9DCW4 255 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfr711Q9EPG2 314 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 TriobpQ99KW3 2014 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Ighv11-2A0A075B5R8 117 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Grin3aA2AIR5 1135 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Zar1lC3VD30 291 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sgo2bJ3QMK1 1167 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Prf1P10820 554 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Csf3rP40223 837 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Impdh1P50096 514 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Stx1bP61264 288 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Tuba1cP68373 449 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Mtf2Q02395 593 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Sdr16c6Q05A13 316 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Nol9Q3TZX8 714 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Pdap1Q3UHX2 181 aaKnown RBP18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Olfml2bQ3V1G4 746 aa18.23■□□□□ 0.51
Trim47-202ENSMUST00000106441 Lcp1Q61233 627 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms