RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Mybpc3O70468 1270 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rpl7aP12970 266 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 F9P16294 471 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Alppl2P24823 529 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 ThrbP37242 461 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Krt6aP50446 553 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Arpp19P56212 112 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ntsr2P70310 416 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Klhl21Q3U410 597 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr325Q5NCD2 326 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Etaa1Q5SVT3 877 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Dennd5aQ6PAL8 1287 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fam109aQ8BH49 266 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pum3Q8BKS9 647 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pik3cbQ8BTI9 1064 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 PxkQ8BX57 582 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Bcas3Q8CCN5 928 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Acsm2Q8K0L3 575 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Agpat4Q8K4X7 378 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Onecut3Q8K557 490 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Oas1dQ8VI95 361 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Serpina3nQ91WP6 418 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 As3mtQ91WU5 376 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pomgnt1Q91X88 660 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pex16Q91XC9 336 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tas1r2Q925I4 843 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmp1Q99KU0 406 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Retreg3Q9CQV4 466 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pdzd4Q9QY39 772 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 ArntlQ9WTL8 632 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Nup98Q6PFD9 1816 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Smurf2A2A5Z6 748 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r11E9Q4X4 861 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Per3O70361 1113 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pgk1P09411 417 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Alkbh1P0CB42 389 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ass1P16460 412 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 UoxP25688 303 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 HmgclP38060 325 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vps33bP59016 617 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pcif1P59114 706 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rab6bP61294 208 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Atp9bP98195 1146 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pgap2Q3TQR0 254 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pcgf5Q3UK78 256 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Klrg2Q3UM83 387 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ankrd42Q3V096 527 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm156Q58A37 223 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Scarf1Q5ND28 820 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tmem45aQ60774 273 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ptp4a1Q63739 173 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gpalpp1Q69ZC8 346 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slf2Q6P9P0 1278 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr1308Q7TQX0 320 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fndc11Q80WB0 326 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zfp454Q80Y34 536 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hus1Q8BQY8 280 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Capn8Q91VA3 703 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Aim2Q91VJ1 354 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ubap2Q91VX2 1132 aaKnown RBP9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hdac11Q91WA3 347 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Dynll2Q9D0M5 89 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Phf6Q9D4J7 364 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Clec2gQ9D676 269 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Cntd1Q9D995 334 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rmdn1Q9DCV4 305 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rdh14Q9ERI6 334 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Chrnb2Q9ERK7 501 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pdk2Q9JK42 407 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc35a2Q9R0M8 390 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Foxo4Q9WVH3 505 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Deaf1Q9Z1T5 566 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Eif2ak1Q9Z2R9 619 aa9.7□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm11758A2BEI6 360 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm11757A2BEI8 360 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm11756A2BEJ1 356 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ptch2O35595 1182 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Itgb3O54890 787 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mkln1O89050 735 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Alox12P39655 663 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc12a1P55014 1095 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ufd1P70362 307 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fam83bQ0VBM2 1012 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mfsd2bQ3T9M1 494 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gtpbp2Q3UJK4 602 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mxd4Q60948 209 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrrc8eQ66JT1 795 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Colgalt2Q6NVG7 625 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 PdprQ7TSQ8 878 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sept9Q80UG5 583 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fam83eQ80XS7 481 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Kansl2Q8BQR4 486 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc9a4Q8BUE1 797 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Usp45Q8K387 813 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Scrn2Q8VCA8 425 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc14a1Q8VHL0 384 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sgo1Q9CXH7 517 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Prl2b1Q9DAZ2 228 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Znhit2Q9QY66 399 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Nav1Q8CH77 1875 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms