RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Lamp2P17047 415 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cbx2P30658 519 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hspa9P38647 679 aaKnown RBP8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Kcnj12P52187 427 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PltpP55065 493 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Il18P70380 192 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ica1P97411 478 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Muc1Q02496 630 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Grm2Q14BI2 872 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Endod1Q8C522 501 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rnf146Q9CZW6 359 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mfap4Q9D1H9 257 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Nme7Q9QXL8 395 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Orc6Q9WUJ8 262 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mpeg1A1L314 713 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zfp982A2A8Q4 368 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Psmc3O88685 442 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Atp6v0d1P51863 351 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Dynll1P63168 89 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Trim71Q1PSW8 855 aaKnown RBP8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tmem248Q3TBN1 314 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pld5Q3UNN8 536 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Bpifb1Q61114 474 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc46a1Q6PEM8 459 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Trim45Q6PFY8 580 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 FukQ7TMC8 1090 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm5622Q810Q0 167 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 4930474N05RikQ8BVR5 218 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tmprss11gQ8BZ10 417 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Trnt1Q8K1J6 434 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Snapc5Q8R2K7 98 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ccdc71Q8VEG0 433 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr394Q8VGR5 310 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 D6Wsu163eQ91YN0 552 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 NplQ9DCJ9 320 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vav3Q9R0C8 847 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Khdrbs2Q9WU01 349 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm11983V9GXS8 105 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zfp362B1ASA5 418 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm3402K7N5P2 326 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vmn2r60L7N2A1 853 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Dhx15O35286 795 aaKnown RBP8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 H2-AaP01910 256 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Prf1P10820 554 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gjb4Q02738 266 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Yes1Q04736 541 aaKnown RBP8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Klrb1Q0ZUP1 214 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hoxa13Q62424 386 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Bpifb9aQ80XI7 591 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sirt7Q8BKJ9 402 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Btbd9Q8C726 612 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Aoc1Q8JZQ5 751 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sumf1Q8R0F3 372 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Q9D8N1 392 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cdk20Q9JHU3 346 aa8.92□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm2022A0A1Y7VLT7 144 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ces1bD3Z5G7 567 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr67F8VPJ8 320 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm2075J3QMW5 144 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm6803J3QPI8 144 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm15023L7MUB4 467 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Stx7O70439 261 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 MitfQ08874 526 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 BB287469Q3UT53 144 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Lasp1Q61792 263 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PnocQ64387 187 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pou2af1Q64693 256 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 HhipQ7TN16 700 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Celf4Q7TSY6 486 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PeloQ80X73 385 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Bpifb3Q80ZU7 473 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Trim65Q8BFW4 522 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ints6lQ8BND4 861 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hdac7Q8C2B3 938 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Capn8Q91VA3 703 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc33a1Q99J27 550 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Metap1dQ9CPW9 335 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 FastkQ9JIX9 511 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Dnajb8Q9QYI7 227 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Arhgap35Q91YM2 1499 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sppl2cA2A6C4 690 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zfy1P10925 782 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sox1P53783 391 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 JPT1P97825 154 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gal3st2cQ3ULK5 396 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hmgb4Q6P8W9 181 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Stoml3Q6PE84 287 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tas2r102Q7M717 329 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tas2r38Q7TQA6 331 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Alkal2Q80UG6 151 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Elfn1Q8C8T7 828 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Asb6Q91ZU1 418 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tmco1Q921L3 188 aaKnown RBP8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CmipQ9D486 773 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cnot9Q9JKY0 299 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zfp811A0A0J9YU71 552 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Esp4A8R0T8 117 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zfp472B0V2W5 534 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ifit3bE9PV48 403 aa8.91□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sh2b3O09039 548 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms