RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 AGAP2Q99490 1192 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 FAM83DQ9H4H8 585 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 CCDC86Q9H6F5 360 aaKnown RBP14.96□□□□□ -0.01
PHGDH-231ENST00000641939 SUDS3Q9H7L9 328 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-231ENST00000641939 C10orf88Q9H8K7 445 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 TRNAU1APQ9NX07 287 aaKnown RBP14.96□□□□□ -0.01
PHGDH-231ENST00000641939 SIRPGQ9P1W8 387 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 ZMIZ1Q9ULJ6 1067 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 PADI4Q9UM07 663 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 SUFUQ9UMX1 484 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 SHOC2Q9UQ13 582 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 CAPN6Q9Y6Q1 641 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 KIF26BQ2KJY2 2108 aa14.96□□□□□ -0.01
PHGDH-231ENST00000641939 COL27A1Q8IZC6 1860 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 LOC285095A0A1B0GVY8 99 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 F5H423 210 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 DDX3YO15523 660 aaKnown RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 KRT86O43790 486 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 PTMAP06454 111 aaKnown RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 IVLP07476 585 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 RBP3P10745 1247 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 GNPDA1P46926 289 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 POLD2P49005 469 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 WNT3AP56704 352 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 MPP3Q13368 585 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 PERM1Q5SV97 790 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 CDCP2Q5VXM1 449 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 DARS2Q6PI48 645 aaKnown RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 DOK6Q6PKX4 331 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 FAM46DQ8NEK8 389 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 CCL4L1Q8NHW4 92 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 MDM1Q8TC05 714 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 GPBAR1Q8TDU6 330 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 EID2BQ96D98 161 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 SCARF2Q96GP6 870 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 OXNAD1Q96HP4 312 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-231ENST00000641939 HES6Q96HZ4 224 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 COX14Q96I36 57 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 MRGPRX2Q96LB1 330 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 GSDMCQ9BYG8 508 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 GPR63Q9BZJ6 419 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 RSPH14Q9UHP6 348 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 GUCA1BQ9UMX6 200 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 TMEM98Q9Y2Y6 226 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 ZNF711Q9Y462 761 aa14.95□□□□□ -0.02
PHGDH-231ENST00000641939 GOLGA6L9A6NEM1 432 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 INPP4BO15327 924 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 EPOP01588 193 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 ILF3Q12906 894 aaKnown RBP eCLIP14.94□□□□□ -0.02
PHGDH-231ENST00000641939 ITPRIPL1Q6GPH6 555 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 OGFOD3Q6PK18 319 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 TMC3Q7Z5M5 1100 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 TRIM74Q86UV6 250 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 GPR156Q8NFN8 814 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 PTCD2Q8WV60 388 aaKnown RBP14.94□□□□□ -0.02
PHGDH-231ENST00000641939 DEPDC7Q96QD5 511 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 FAM118BQ9BPY3 351 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 SPATA16Q9BXB7 569 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 CDH19Q9H159 772 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 GBA3Q9H227 469 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 DPEP2Q9H4A9 486 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 RAD18Q9NS91 495 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 CNOT6Q9ULM6 557 aaKnown RBP14.94□□□□□ -0.02
PHGDH-231ENST00000641939 ZFHX4Q86UP3 3567 aa14.94□□□□□ -0.02
PHGDH-231ENST00000641939 DSPP15924 2871 aaKnown RBP14.93□□□□□ -0.02
PHGDH-231ENST00000641939 FADS2P1A8MWK0 482 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 B4DGG1 531 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 KCNN4O15554 427 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 ZNF189O75820 626 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-231ENST00000641939 ANXA9O76027 345 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 STK10O94804 968 aaKnown RBP14.93□□□□□ -0.02
PHGDH-231ENST00000641939 ASMTLO95671 621 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 SLC4A1P02730 911 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 ADCY8P40145 1251 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 DCDC1P59894 354 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 CYP4F3Q08477 520 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 SIRPB2Q5JXA9 342 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 PROSER1Q86XN7 944 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 NRROSQ86YC3 692 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 LRRC8AQ8IWT6 810 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 SLC25A41Q8N5S1 370 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 TTC13Q8NBP0 860 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 GPR26Q8NDV2 337 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 IPMKQ8NFU5 416 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 OR6C4Q8NGE1 309 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 WDR48Q8TAF3 677 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 UBE2Q2Q8WVN8 375 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 NXPE2Q96DL1 559 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 CCDC3Q9BQI4 270 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 ZSCAN5AQ9BUG6 496 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 TRABDQ9H4I3 376 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 VPS18Q9P253 973 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 NFKBIL1Q9UBC1 381 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-231ENST00000641939 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 SPO11Q9Y5K1 396 aa14.93□□□□□ -0.02
PHGDH-231ENST00000641939 NOBOXO60393 691 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 TCEA3O75764 348 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 ATP1A1P05023 1023 aaKnown RBP14.92□□□□□ -0.02
PHGDH-231ENST00000641939 HLA-DPA1P20036 260 aa14.92□□□□□ -0.02
PHGDH-231ENST00000641939 CHRNA4P43681 627 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms