RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CTRCQ99895 268 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 WDR83Q9BRX9 315 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 WDR12Q9GZL7 423 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 LHPPQ9H008 270 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 AASSQ9UDR5 926 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 RUVBL2Q9Y230 463 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 DNMT3AQ9Y6K1 912 aaPredicted RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 C3orf70A6NLC5 250 aaPredicted RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 F8W810 466 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 CDKN2BP42772 138 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 ALDH3B2P48448 385 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 KRT6CP48668 564 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 SERPINB9P50453 376 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 STX5Q13190 355 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 OLIG2Q13516 323 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 MBLAC2Q68D91 279 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 LRRC49Q8IUZ0 686 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 ELMOD1Q8N336 334 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 NCLNQ969V3 563 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 SIPA1Q96FS4 1042 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 MUS81Q96NY9 551 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 GATA5Q9BWX5 397 aaPredicted RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 PLSCR3Q9NRY6 295 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 DCDC2Q9UHG0 476 aa11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 TSR3Q9UJK0 312 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-224ENST00000641259 C16orf96A6NNT2 1141 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 HDAC3O15379 428 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 MTSS1O43312 755 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 NOBOXO60393 691 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 INHAP05111 366 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 EIF2S1P05198 315 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNF37AP17032 561 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ADORA2BP29275 332 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ST13P50502 369 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SCNN1GP51170 649 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CYP4F2P78329 520 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CYP4F3Q08477 520 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNF267Q14586 743 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 STILQ15468 1287 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 C15orf59Q2T9L4 293 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 TEX44Q53QW1 395 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 HEATR6Q6AI08 1181 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SCUBE3Q8IX30 993 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 LEMD2Q8NC56 503 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 RAET1EQ8TD07 263 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 NXNL1Q96CM4 212 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SH3YL1Q96HL8 342 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNF347Q96SE7 839 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ASPSCR1Q9BZE9 553 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 C14orf119Q9NWQ9 140 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 PAK5Q9P286 719 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 TBC1D4O60343 1298 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 POLR2EP19388 210 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 TFEBP19484 476 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 RPL14P50914 215 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 APLP1P51693 650 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 DPYSQ14117 519 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SYT16Q17RD7 645 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CCDC28AQ8IWP9 274 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 MIER2Q8N344 545 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 NIPA2Q8N8Q9 360 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SLC35F5Q8WV83 523 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 BIRC7Q96CA5 298 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 PEBP4Q96S96 227 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SYBUQ9NX95 663 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 TIMM13Q9Y5L4 95 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 GOLGA4Q13439 2230 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CASTOR2A6NHX0 329 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 CLDN5O00501 218 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 UBDO15205 165 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 NUPL2O15504 423 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 HUS1O60921 280 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SULT1C4O75897 302 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ALDH2P05091 517 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 MLLT10P55197 1068 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ARMC4Q5T2S8 1044 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 GRAMD2AQ8IUY3 354 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 TRIM48Q8IWZ4 208 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 TBC1D21Q8IYX1 336 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 PLD6Q8N2A8 252 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNF296Q8WUU4 475 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 SLC45A3Q96JT2 553 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 C9orf16Q9BUW7 83 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNHIT2Q9UHR6 403 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 BTBD3Q9Y2F9 522 aa11.82□□□□□ -0.52
RBFOX1-224ENST00000641259 MSI1O43347 362 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-224ENST00000641259 CLASP2O75122 1294 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-224ENST00000641259 BCAS2O75934 225 aaPredicted RBP11.81□□□□□ -0.52
RBFOX1-224ENST00000641259 BEST1O76090 585 aa11.81□□□□□ -0.52
RBFOX1-224ENST00000641259 FADS2O95864 444 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-224ENST00000641259 PDGFRAP16234 1089 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms