RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 THOP1P52888 689 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ZNF697Q5TEC3 545 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 CNTD1Q8N815 330 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 TNKS2Q9H2K2 1166 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 STK16O75716 305 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 PABPC1P11940 636 aaKnown RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 IDH3AP50213 366 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ZIK1Q3SY52 487 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 CPSF7Q8N684 471 aaKnown RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 CLP1Q92989 425 aaKnown RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 PLD4Q96BZ4 506 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ZFYVE19Q96K21 471 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 EBF4Q9BQW3 602 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 PRRG3Q9BZD7 231 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ADAMTS5Q9UNA0 930 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 FCF1Q9Y324 198 aaKnown RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 H3BN98 237 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 LRATO95237 230 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 PAFAH1B3Q15102 231 aaKnown RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 TRIM16LQ309B1 348 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 SWT1Q5T5J6 900 aaKnown RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 CHPFQ8IZ52 775 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 SEC14L1Q92503 715 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 TSSK3Q96PN8 268 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 S100A14Q9HCY8 104 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ENOPH1Q9UHY7 261 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ASF1AQ9Y294 204 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 RFXANKO14593 260 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 ADSLP30566 484 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 GNPDA1P46926 289 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 PROX1Q92786 737 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 MAGEB10Q96LZ2 347 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-223ENST00000640640 CRTAC1Q9NQ79 661 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 PDLIM7Q9NR12 457 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 USE1Q9NZ43 259 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 FBXO10Q9UK96 956 aa17.51■□□□□ 0.39
SCARB2-223ENST00000640640 SERPINB1P30740 379 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 SPATA19Q7Z5L4 167 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 C8orf59Q8N0T1 100 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-223ENST00000640640 PGAM4Q8N0Y7 254 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 OSBPL6Q9BZF3 934 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 KRCC1Q9NPI7 259 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-223ENST00000640640 AP4B1Q9Y6B7 739 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 CDK14O94921 469 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 BCL10O95999 233 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 WNT7BP56706 349 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 RALGDSQ12967 914 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 TSNQ15631 228 aaKnown RBP17.5■□□□□ 0.39
SCARB2-223ENST00000640640 PHF21AQ96BD5 680 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 CEP44Q9C0F1 390 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 IPPKQ9H8X2 491 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 SRRDQ9UH36 339 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 C3orf18Q9UK00 162 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 NAV1Q8NEY1 1877 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 UBXN8O00124 270 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 MGRN1O60291 552 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 LPCAT4Q643R3 524 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 OR8D1Q8WZ84 308 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 MPP4Q96JB8 637 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 CLIC5Q9NZA1 410 aa17.5■□□□□ 0.39
SCARB2-223ENST00000640640 GUCY1B2O75343 617 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 ADH1CP00326 375 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 HPGDP15428 266 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 OGNP20774 298 aaKnown RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 RPS7P62081 194 aaKnown RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 PRKD1Q15139 912 aaPredicted RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 CPNE9Q8IYJ1 553 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 C10orf53Q8N6V4 93 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 FEM1CQ96JP0 617 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 SIGLEC10Q96LC7 697 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 PPM1MQ96MI6 270 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 FAM53CQ9NYF3 392 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 RPS6KA6Q9UK32 745 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 ENTPD4Q9Y227 616 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 NEMP2A6NFY4 417 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 GABRDO14764 452 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 CCL16O15467 120 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 ESR1P03372 595 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 PAX7P23759 505 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 C1DQ13901 141 aaKnown RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 KHDC1Q4VXA5 237 aaKnown RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 SVOPQ8N4V2 548 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 ARHGEF3Q9NR81 526 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 DEC1Q9P2X7 70 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 ITM2BQ9Y287 266 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 HNF4AP41235 474 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 FOLH1Q04609 750 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 NCF4Q15080 339 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 FAM46CQ5VWP2 391 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 ZDHHC20Q5W0Z9 365 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 CYP20A1Q6UW02 462 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 TSPAN14Q8NG11 270 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 RPL10LQ96L21 214 aaKnown RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 NLNQ9BYT8 704 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 SMOC2Q9H3U7 446 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 NOL11Q9H8H0 719 aaKnown RBP17.49■□□□□ 0.39
SCARB2-223ENST00000640640 GKN1Q9NS71 199 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 A0A1W2PQ67 120 aa17.49■□□□□ 0.39
SCARB2-223ENST00000640640 NPHS1O60500 1241 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms