RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 MC4RP32245 332 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 INPP5AQ14642 412 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 ERCC6LQ2NKX8 1250 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 PDPK2PQ6A1A2 396 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 GCNT7Q6ZNI0 430 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 PLA2G15Q8NCC3 412 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 FBXO36Q8NEA4 188 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 OR13J1Q8NGT2 312 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 OR6P1Q8NGX9 317 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 PYROXD1Q8WU10 500 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 SKA1Q96BD8 255 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 CFAP36Q96G28 342 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 LOXL4Q96JB6 756 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 TBATAQ96M53 351 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 ANKZF1Q9H8Y5 726 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 TM9SF3Q9HD45 589 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 IL26Q9NPH9 171 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 ZC3H7BQ9UGR2 993 aaKnown RBP21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 TEX264Q9Y6I9 313 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 RALGAPA1Q6GYQ0 2036 aa21.46■■□□□ 1.03
TSPAN9-208ENST00000640568 PRR5-ARHGAP8B1AHC4 643 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 H7C0S8 307 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 SRP72O76094 671 aaKnown RBP21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 ITGALP20701 1170 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 CD38P28907 300 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 ANKRD20A4Q4UJ75 823 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 ZRANB3Q5FWF4 1079 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 AFTPHQ6ULP2 937 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 KYAT3Q6YP21 454 aaKnown RBP21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 RABEPKQ7Z6M1 372 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 SYT12Q8IV01 421 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 HDAC10Q969S8 669 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 AGAP2Q99490 1192 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 SEMA4AQ9H3S1 761 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 ASB8Q9H765 288 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 WDR26Q9H7D7 661 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 TREX1Q9NSU2 369 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 FAM86C1Q9NVL1 165 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 PILRBQ9UKJ0 227 aa21.45■■□□□ 1.03
TSPAN9-208ENST00000640568 PLXNB3Q9ULL4 1909 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 A0A1B0GTW7 788 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 POM121BA6NF01 834 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 H0Y8X5 98 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 K7ESM1 405 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 TOR1BO14657 336 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 MCM3P25205 808 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 RABIFP47224 123 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 ARSDP51689 593 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 AFF3P51826 1226 aaKnown RBP21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 ACVR1Q04771 509 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 PEX6Q13608 980 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 FASTKD3Q14CZ7 662 aaKnown RBP21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 TEAD4Q15561 434 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 CHRNA6Q15825 494 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 SPANXN3Q5MJ09 141 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 LAIR1Q6GTX8 287 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 TMEM135Q86UB9 458 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 PALM2Q8IXS6 379 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.45■■□□□ 1.023e-6■■■■■ 32
TSPAN9-208ENST00000640568 KLHDC7BQ96G42 594 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 TRIM56Q9BRZ2 755 aaKnown RBP21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 SUDS3Q9H7L9 328 aaPredicted RBP21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 PHPT1Q9NRX4 125 aaPredicted RBP21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 CRLS1Q9UJA2 301 aa21.45■■□□□ 1.02
TSPAN9-208ENST00000640568 PI4KAP42356 2102 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 CACNB4O00305 520 aaPredicted RBP21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 MAGEC1O60732 1142 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 EPN2O95208 641 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 TEAD1P28347 426 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 ECHS1P30084 290 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 HOXD12P35452 270 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 KIAA0930Q6ICG6 404 aaPredicted RBP21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 SNX20Q7Z614 316 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 ABI3BPQ7Z7G0 1075 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 HEATR4Q86WZ0 1026 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 PELI3Q8N2H9 469 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 OTUD6BQ8N6M0 293 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 ZNF398Q8TD17 642 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 DTX3LQ8TDB6 740 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 BMFQ96LC9 184 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 APOOQ9BUR5 198 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 GMEB2Q9UKD1 530 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 OR1A2Q9Y585 309 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 SLCO1B1Q9Y6L6 691 aa21.44■■□□□ 1.02
TSPAN9-208ENST00000640568 CCDC162PA2VCL2 907 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 FADS2P1A8MWK0 482 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 INPP4BO15327 924 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 GOT2P00505 430 aaKnown RBP21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 THEGLP0DJG4 465 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 PSMA3P25788 255 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 TNFRSF8P28908 595 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 MAGEA4P43358 317 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 THOP1P52888 689 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 C21orf59P57076 290 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 YPEL5P62699 121 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 XIAPP98170 497 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 CACNG1Q06432 222 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 CBLBQ13191 982 aa21.43■■□□□ 1.02
TSPAN9-208ENST00000640568 NFATC2Q13469 925 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms