RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CLCQ05315 142 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF33AQ06730 810 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 MANEALQ5VSG8 457 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 GPR107Q5VW38 600 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 LRRC58Q96CX6 371 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 MUC3BQ9H195 1237 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 ZSWIM8A7E2V4 1837 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 KATNA1O75449 491 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 PEX11BO96011 259 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 UFM1P61960 85 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 PPP1R8Q12972 351 aaKnown RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 UGT3A1Q6NUS8 523 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 ERMP1Q7Z2K6 904 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 ANKRD23Q86SG2 305 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 EPHX4Q8IUS5 362 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 OR4K2Q8NGD2 314 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 OR4L1Q8NH43 312 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 BHMTQ93088 406 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 FBXO32Q969P5 355 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 KCTD14Q9BQ13 255 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 NACA2Q9H009 215 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 MFSD1Q9H3U5 465 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 GALPQ9UBC7 116 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 TNPO2O14787 897 aaKnown RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 B4GALT3O60512 393 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 NDUFS3O75489 264 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 SLC6A2P23975 617 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 TRAP1Q12931 704 aaKnown RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 UGT3A2Q3SY77 523 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 CAMK1DQ8IU85 385 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 DRAXINQ8NBI3 349 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 ZC3H15Q8WU90 426 aaKnown RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 GPR21Q99679 349 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 TRIM62Q9BVG3 475 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 MRM3Q9HC36 420 aaKnown RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 POLR3BQ9NW08 1133 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 IKZF3Q9UKT9 509 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 IQCF5A8MTL0 148 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 B4GAT1O43505 415 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TXNL4AP83876 142 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TUSC3Q13454 348 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 DCTN2Q13561 401 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PTPRNQ16849 979 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 NHSL2Q5HYW2 709 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PAGE3Q5JUK9 113 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TMEM214Q6NUQ4 689 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 FNDC5Q8NAU1 212 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 OR7D4Q8NG98 312 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PPM1MQ96MI6 270 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TSPAN18Q96SJ8 248 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 ALG2Q9H553 416 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 VPS45Q9NRW7 570 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 INTS7Q9NVH2 962 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PLK2Q9NYY3 685 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PLXNB2O15031 1838 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 OR1I1O60431 355 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TFPTP0C1Z6 253 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 MTHFD2P13995 350 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 MERTKQ12866 999 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 MAPRE1Q15691 268 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 AAK1Q2M2I8 961 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PABPC1LQ4VXU2 614 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 DNAJC14Q6Y2X3 702 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 GAB3Q8WWW8 586 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TRMOQ9BU70 441 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 POLR1EQ9GZS1 481 aaKnown RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 GID8Q9NWU2 228 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 MARCH2Q9P0N8 246 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TNFRSF10BO14763 440 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 ITGB6P18564 788 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 GGT5P36269 586 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 ENTPD1P49961 510 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 LIPEQ05469 1076 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 LPIN1Q14693 890 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PDZD8Q8NEN9 1154 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 RIN3Q8TB24 985 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 GIPC2Q8TF65 315 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 POLR1BQ9H9Y6 1135 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 CD274Q9NZQ7 290 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 SUN2Q9UH99 717 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 TMCO1Q9UM00 188 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 PHF24Q9UPV7 400 aa14.53□□□□□ -0.08
SCARB2-221ENST00000640341 MAGED1Q9Y5V3 778 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-221ENST00000640341 ATXN1LP0C7T5 689 aaKnown RBP14.52□□□□□ -0.08
SCARB2-221ENST00000640341 PIK3CGP48736 1102 aa14.52□□□□□ -0.08
SCARB2-221ENST00000640341 GSK3BP49841 420 aa14.52□□□□□ -0.08
SCARB2-221ENST00000640341 FAM43BQ6ZT52 329 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-221ENST00000640341 ARRDC2Q8TBH0 407 aa14.52□□□□□ -0.08
SCARB2-221ENST00000640341 HGH1Q9BTY7 390 aa14.52□□□□□ -0.08
SCARB2-221ENST00000640341 TRIM15Q9C019 465 aa14.52□□□□□ -0.08
SCARB2-221ENST00000640341 PCDHGC4Q9Y5F7 938 aa14.52□□□□□ -0.08
SCARB2-221ENST00000640341 CCDC154A6NI56 674 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 SNX2O60749 519 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 NIPSNAP2O75323 286 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 ECI2O75521 394 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 SNAP29O95721 258 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 RHOQP17081 205 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 PBX3P40426 434 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 TAF10Q12962 218 aa14.52□□□□□ -0.09
SCARB2-221ENST00000640341 ZRANB3Q5FWF4 1079 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms