RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SEPT8Q92599 483 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 PLEKHG4BQ96PX9 1271 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 PHF12Q96QT6 1004 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 ATOH8Q96SQ7 321 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 TUBB1Q9H4B7 451 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 POLG2Q9UHN1 485 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 KCTD3Q9Y597 815 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 PCDHA9Q9Y5H5 950 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 CD3EAPO15446 510 aaKnown RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 GFAPP14136 432 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 UGT1A6P19224 532 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 PURAQ00577 322 aaKnown RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 MAP2K5Q13163 448 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 MSANTD2Q6P1R3 559 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 CMTR2Q8IYT2 770 aaKnown RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 RSPH1Q8WYR4 309 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 ISOC1Q96CN7 298 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 SLC39A13Q96H72 371 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 OSBPL6Q9BZF3 934 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 SLC52A3Q9NQ40 469 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 FLRT1Q9NZU1 646 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 SH3PXD2BA1X283 911 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 FAM149AA5PLN7 773 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 GOT2P00505 430 aaKnown RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 FSCN1Q16658 493 aaKnown RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 OGFOD2Q6N063 350 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 CLVS1Q8IUQ0 354 aaPredicted RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 HASPINQ8TF76 798 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 PSMG2Q969U7 264 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 OAZ3Q9UMX2 235 aa20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 FAF1Q9UNN5 650 aaPredicted RBP20.05■□□□□ 0.8
SYNGAP1-227ENST00000638142 LRRC14BA6NHZ5 514 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 TPST1O60507 370 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 POMCP01189 267 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 OXTRP30559 389 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 MRPL19P49406 292 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 LCP2Q13094 533 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 MORN1Q5T089 497 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 GPR180Q86V85 440 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 HSPBAP1Q96EW2 488 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 NSUN5Q96P11 429 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 A0A1W2PP18 115 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 CLASP2O75122 1294 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 OGNP20774 298 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 GRIK2Q13002 908 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 SPATA19Q7Z5L4 167 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 PTRH1Q86Y79 214 aaKnown RBP20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 COLGALT2Q8IYK4 626 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 TMEM125Q96AQ2 219 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 KCNA7Q96RP8 456 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 FAIMQ9NVQ4 179 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 GPR45Q9Y5Y3 372 aa20.04■□□□□ 0.8
SYNGAP1-227ENST00000638142 KANSL1LA0AUZ9 987 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 H3BMM5 538 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 ACOX3O15254 700 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 RPP40O75818 363 aaKnown RBP20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 LINC00032P0C843 101 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 HLA-DPA1P20036 260 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 CHRM3P20309 590 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 RPL10P27635 214 aaKnown RBP20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 TTKP33981 857 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 CLCQ05315 142 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 Q6ZNX1 250 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZNF354CQ86Y25 554 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 AARSD1Q9BTE6 412 aaKnown RBP20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 HEMK1Q9Y5R4 338 aaPredicted RBP20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 TYW5A2RUC4 315 aaKnown RBP20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 C9JVG2 144 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 GPR182O15218 404 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 KERAO60938 352 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 FGF1P05230 155 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 CTSHP09668 335 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 TBX4P57082 545 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 CYP51A1Q16850 503 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 ALFQ53S48 1182 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 MS4A13Q5J8X5 152 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 MON1AQ86VX9 555 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 PGBD5Q8N414 524 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 KIAA1191Q96A73 305 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 ALG2Q9H553 416 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 CDH7Q9ULB5 785 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 BTRCQ9Y297 605 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 DOCK4Q8N1I0 1966 aa20.03■□□□□ 0.8
SYNGAP1-227ENST00000638142 IGLV3-10A0A075B6K4 115 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 CCDC162PA2VCL2 907 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 SNAP91O60641 907 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZNF623O75123 536 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 CNTN5O94779 1100 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 HNRNPCP07910 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 UMPSP11172 480 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 RFC2P35250 354 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 GSK3BP49841 420 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 IL10RBQ08334 325 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 NFYCQ13952 458 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 BTG3Q14201 252 aaPredicted RBP20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 RCAN2Q14206 197 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 ABRAXAS1Q6UWZ7 409 aa20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 PAPD5Q8NDF8 572 aaKnown RBP20.02■□□□□ 0.8
SYNGAP1-227ENST00000638142 STAG3L4Q8TBR4 150 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms