RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 RB1P06400 928 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ATP6V1B1P15313 513 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 GRK6P43250 576 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MLLT1Q03111 559 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ZNF776Q68DI1 518 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 SHQ1Q6PI26 577 aaKnown RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ENPP7Q6UWV6 458 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 STK32CQ86UX6 486 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ANKRD52Q8NB46 1076 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MAPK15Q8TD08 544 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 GIPC3Q8TF64 312 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 FAM117AQ9C073 453 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 COMMD4Q9H0A8 199 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 STBD1O95210 358 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ATP4AP20648 1035 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ITGA3P26006 1051 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 HTR7P34969 479 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PRKCZQ05513 592 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 KIAA0319Q5VV43 1072 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 EMC1Q8N766 993 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 FAM46DQ8NEK8 389 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MCMBPQ9BTE3 642 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 DUSP16Q9BY84 665 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 CST11Q9H112 138 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MCUBQ9NWR8 336 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MORF4L1Q9UBU8 362 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 UBR1Q8IWV7 1749 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 EDDM13A0A1B0GTR0 161 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 A8MU76 341 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 LOC110117498-PIK3R3F6TDL0 507 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 OR5F1O95221 314 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 HEXBP07686 556 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 LTA4HP09960 611 aaKnown RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 NRIP1P48552 1158 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 BNIP1Q12981 228 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 C16orf46Q6P387 395 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 KYQ8NBH2 561 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 OR4L1Q8NH43 312 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ZNF606Q8WXB4 792 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PIK3R3Q92569 461 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ZNF514Q96K75 400 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 HEPHQ9BQS7 1158 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 WDR18Q9BV38 432 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 BHLHE41Q9C0J9 482 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 CALML5Q9NZT1 146 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ACTL7BQ9Y614 415 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 RIIAD1A6NNX1 92 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 TSC22D2O75157 780 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ETS1P14921 441 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 TCF4P15884 667 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 HSD11B1P28845 292 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 EPS8Q12929 822 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 TBCELQ5QJ74 424 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 RSBN1Q5VWQ0 802 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 DNM1P34Q6PK57 102 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 TMPPEQ6ZT21 453 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 LRRC52Q8N7C0 313 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 FRS2Q8WU20 508 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MR1Q95460 341 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 COQ7Q99807 217 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PTGES2Q9H7Z7 377 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 METTL7AQ9H8H3 244 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 SMURF1Q9HCE7 757 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 HMGXB4Q9UGU5 601 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 RIMKLBQ9ULI2 386 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 A0A1W2PQ45 241 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 A0A1W2PQY0 241 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PLD2O14939 933 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 UGT2B4P06133 528 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MC4RP32245 332 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 CASP4P49662 377 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PKP1Q13835 747 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 LCN1P1Q5VSP4 162 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 C9orf57Q5W0N0 161 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ALG1LQ6GMV1 187 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MZT2BQ6NZ67 158 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 TMC5Q6UXY8 1006 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ATOH1Q92858 354 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 SEPHS2Q99611 448 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 DDX18Q9NVP1 670 aaKnown RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MED31Q9Y3C7 131 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PTPRUQ92729 1446 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 E5RJQ4 531 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 OR10H3O60404 316 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PROSCO94903 275 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 TNFAIP8O95379 198 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 GLI1P08151 1106 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 HOXB2P14652 356 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 RASA2Q15283 850 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ELOCQ15369 112 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 MLIPQ5VWP3 458 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 ARL9Q6T311 187 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 CYP2U1Q7Z449 544 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 NUS1Q96E22 293 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 FKBP14Q9NWM8 211 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 PIH1D1Q9NWS0 290 aaKnown RBP6.11□□□□□ -1.43
SCN1A-217ENST00000637988 FBXL12Q9NXK8 326 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 CROTQ9UKG9 612 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 COG5Q9UP83 839 aa6.11□□□□□ -1.43
SCN1A-217ENST00000637988 OAS3Q9Y6K5 1087 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms