RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CDK3Q00526 305 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 B4GALNT1Q00973 533 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ZFP36L1Q07352 338 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 ZNF235Q14590 738 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ACOX1Q15067 660 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TAZQ16635 292 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 MAP9Q49MG5 647 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 C3orf38Q5JPI3 329 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 CERCAMQ5T4B2 595 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 MARC1Q5VT66 337 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 LRRC66Q68CR7 880 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 SLC9A4Q6AI14 798 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 C11orf63Q6NUN7 778 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TRIM74Q86UV6 250 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 NT5DC3Q86UY8 548 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 HEATR4Q86WZ0 1026 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 NAGSQ8N159 534 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 SDR16C5Q8N3Y7 309 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 FSTL5Q8N475 847 aaPredicted RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 ATPAF2Q8N5M1 289 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.82□□□□□ -1.16
PNKP-229ENST00000637897 NOA1Q8NC60 698 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 SPATA4Q8NEY3 305 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ACTRT1Q8TDG2 376 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 PDCD6IPQ8WUM4 868 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 FATE1Q969F0 183 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 NUS1Q96E22 293 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 NAF1Q96HR8 494 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 COX14Q96I36 57 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 OLFM3Q96PB7 478 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 RNF157Q96PX1 679 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 DEPDC7Q96QD5 511 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TRIB3Q96RU7 358 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 C1QTNF7Q9BXJ2 289 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TDRD1Q9BXT4 1180 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 FOXP3Q9BZS1 431 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 GOLPH3Q9H4A6 298 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 POLR1BQ9H9Y6 1135 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 CYP4F12Q9HCS2 524 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 DONSONQ9NYP3 566 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 CTTNBP2NLQ9P2B4 639 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 UVRAGQ9P2Y5 699 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 GULP1Q9UBP9 304 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ATXN7L1Q9ULK2 861 aaPredicted RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 SUFUQ9UMX1 484 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 GPR34Q9UPC5 381 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 CHKBQ9Y259 395 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 SLC17A4Q9Y2C5 497 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TMEM98Q9Y2Y6 226 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 OAS3Q9Y6K5 1087 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 ZFC3H1O60293 1989 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 KALRNO60229 2985 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 FADS2P1A8MWK0 482 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 D6RAR5 112 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 KCNK1O00180 336 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 PPM1DO15297 605 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 DNAJC6O75061 913 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 CLDN7O95471 211 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 TNFP01375 233 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 MYCLP1P12525 358 aaPredicted RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 CCNB1P14635 433 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 WT1P19544 449 aaPredicted RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 CCNCP24863 283 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 TEAD1P28347 426 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 MAN1A1P33908 653 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 CD68P34810 354 aaPredicted RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 HSPA9P38646 679 aaKnown RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 ABCG1P45844 678 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 MARCKSL1P49006 195 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 DUSP3P51452 185 aaPredicted RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 DPTQ07507 201 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 PPIDQ08752 370 aaKnown RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 KRT81Q14533 505 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 MESDQ14696 234 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 NR1D2Q14995 579 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 ELOCQ15369 112 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 QPCTQ16769 361 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 ARMC12Q5T9G4 340 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 DENND2CQ68D51 928 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 MFSD7Q6UXD7 560 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 RBM44Q6ZP01 1051 aaKnown RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 MICALCLQ6ZW33 695 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 ZNF438Q7Z4V0 828 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 SPRED1Q7Z699 444 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 CLEC14AQ86T13 490 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 SLITRK4Q8IW52 837 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 PMEPA1Q969W9 287 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 HDAC11Q96DB2 347 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 HES6Q96HZ4 224 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 LYSMD1Q96S90 227 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 NAP1L3Q99457 506 aaPredicted RBP7.81□□□□□ -1.16
PNKP-229ENST00000637897 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 SEMA4CQ9C0C4 833 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 LRRN3Q9H3W5 708 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 WDR26Q9H7D7 661 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 CPNE5Q9HCH3 593 aa7.81□□□□□ -1.16
PNKP-229ENST00000637897 RBM22Q9NW64 420 aaKnown RBP eCLIP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms