RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 TEKT4Q8WW24 435 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 JPH3Q8WXH2 748 aaPredicted RBP16.33■□□□□ 0.2
CLN3-255ENST00000637100 RTP4Q96DX8 246 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 WDR24Q96S15 920 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 LYSMD1Q96S90 227 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 SARS2Q9NP81 518 aaKnown RBP16.33■□□□□ 0.2
CLN3-255ENST00000637100 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
CLN3-255ENST00000637100 WDR70Q9NW82 654 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 VPS18Q9P253 973 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 CNOT8Q9UFF9 292 aaKnown RBP16.33■□□□□ 0.2
CLN3-255ENST00000637100 CNOT6Q9ULM6 557 aaKnown RBP16.33■□□□□ 0.2
CLN3-255ENST00000637100 SCINQ9Y6U3 715 aa16.33■□□□□ 0.2
CLN3-255ENST00000637100 LRRC53A6NM62 1247 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 ZNF891A8MT65 544 aaPredicted RBP16.32■□□□□ 0.2
CLN3-255ENST00000637100 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 EML2O95834 649 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 PRLP01236 227 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 MYBL1P10243 752 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 RARAP10276 462 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 TCF4P15884 667 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 CES1P23141 567 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 MAP4P27816 1152 aaKnown RBP16.32■□□□□ 0.2
CLN3-255ENST00000637100 ARL4AP40617 200 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 MAXP61244 160 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 LRRC66Q68CR7 880 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 EXD1Q8NHP7 514 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 PDCD6IPQ8WUM4 868 aaKnown RBP16.32■□□□□ 0.2
CLN3-255ENST00000637100 MAML1Q92585 1016 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 SCAMP4Q969E2 229 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 AP2M1Q96CW1 435 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 AGAP2Q99490 1192 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 ZPBPQ9BS86 351 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 PCDH18Q9HCL0 1135 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 MRPL47Q9HD33 250 aaKnown RBP16.32■□□□□ 0.2
CLN3-255ENST00000637100 RCOR3Q9P2K3 495 aaPredicted RBP16.32■□□□□ 0.2
CLN3-255ENST00000637100 AMACRQ9UHK6 382 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 TMEM98Q9Y2Y6 226 aa16.32■□□□□ 0.2
CLN3-255ENST00000637100 A0A0U1RQS6 177 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 CDK11BP21127 795 aaKnown RBP16.31■□□□□ 0.2
CLN3-255ENST00000637100 SERPINB6P35237 376 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 CASRP41180 1078 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 CCR10P46092 362 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 CLCNKAP51800 687 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 EPHA4P54764 986 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 FOXK1P85037 733 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 ABHD18Q0P651 414 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 DENND2CQ68D51 928 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 ANKS6Q68DC2 871 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 IYDQ6PHW0 289 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 TIPARPQ7Z3E1 657 aaKnown RBP16.31■□□□□ 0.2
CLN3-255ENST00000637100 TRIM11Q96F44 468 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 DNPEPQ9ULA0 475 aa16.31■□□□□ 0.2
CLN3-255ENST00000637100 PCYT1BQ9Y5K3 369 aaPredicted RBP16.31■□□□□ 0.2
CLN3-255ENST00000637100 LOC101059948A0A1B0GTJ6 334 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 EFCAB7A8K855 629 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 DUX1O43812 170 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 DLGAP3O95886 979 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 CTPS1P17812 591 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 MPSTP25325 297 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 ARSEP51690 589 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 RPL26P61254 145 aaKnown RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 SLC25A11Q02978 314 aaKnown RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 MAP7Q14244 749 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 PIGHQ14442 188 aaPredicted RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 STX1AQ16623 288 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 NLGN4XQ8N0W4 816 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 NDUFAF2Q8N183 169 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 ATPAF2Q8N5M1 289 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 NLGN4YQ8NFZ3 816 aaPredicted RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 OR10G6Q8NH81 332 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 ARRDC2Q8TBH0 407 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 TSGA13Q96PP4 275 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 SMIM14Q96QK8 99 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 EPN3Q9H201 632 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 TRIT1Q9H3H1 467 aaKnown RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 EPB41L1Q9H4G0 881 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 SUDS3Q9H7L9 328 aaPredicted RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 RMI1Q9H9A7 625 aa16.3■□□□□ 0.2
CLN3-255ENST00000637100 SIDT1Q9NXL6 827 aaKnown RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 RPL26L1Q9UNX3 145 aaKnown RBP16.3■□□□□ 0.2
CLN3-255ENST00000637100 ZFC3H1O60293 1989 aaKnown RBP16.29■□□□□ 0.2
CLN3-255ENST00000637100 NKX2-8O15522 239 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 ANKRD34CP0C6C1 535 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 BIRC2Q13490 618 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 PAFAH1B3Q15102 231 aaKnown RBP16.29■□□□□ 0.2
CLN3-255ENST00000637100 HENMT1Q5T8I9 393 aaKnown RBP16.29■□□□□ 0.2
CLN3-255ENST00000637100 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 CEACAM20Q6UY09 585 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 TRIM74Q86UV6 250 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 GALNT13Q8IUC8 556 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 NSMCE1Q8WV22 266 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 SH3KBP1Q96B97 665 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 ZNF653Q96CK0 615 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 SLC38A3Q99624 504 aa16.29■□□□□ 0.2
CLN3-255ENST00000637100 RIOK2Q9BVS4 552 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms