RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 HSPA13P48723 471 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 ADARP55265 1226 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 PKNOX1P55347 436 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CLCQ05315 142 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 IKBKEQ14164 716 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 OR4D1Q15615 310 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 PTPRNQ16849 979 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 KIF19Q2TAC6 998 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 MAP7D1Q3KQU3 841 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 PABPC1LQ4VXU2 614 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 SAMD4BQ5PRF9 694 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 SPOUT1Q5T280 376 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 KANK2Q63ZY3 851 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 LPCAT4Q643R3 524 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CLEC6AQ6EIG7 209 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 NCEH1Q6PIU2 408 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 PAQR3Q6TCH7 311 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 TWIST2Q8WVJ9 160 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 EXOC2Q96KP1 924 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CCT7Q99832 543 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 C19orf43Q9BQ61 176 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 C1QTNF3Q9BXJ4 246 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 NUSAP1Q9BXS6 441 aaKnown RBP12.07□□□□□ -0.48
CLN8-212ENST00000637083 HIPK3Q9H422 1215 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 GKN1Q9NS71 199 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 NDUFAF1Q9Y375 327 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 PKP3Q9Y446 797 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 CHD5Q8TDI0 1954 aa12.07□□□□□ -0.48
CLN8-212ENST00000637083 TSPAN3O60637 253 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PQBP1O60828 265 aaKnown RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 TMCC1O94876 653 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 SEC24AO95486 1093 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ESR1P03372 595 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 F11P03951 625 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 IRF1P10914 325 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 MBL2P11226 248 aaPredicted RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 MTHFD2P13995 350 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 LBPP18428 481 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PEX2P28328 305 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PTGER3P43115 390 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 CLCN2P51788 898 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 EPHB3P54753 998 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 CDH13P55290 713 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 IL2P60568 153 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 RHOAP61586 193 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 SH3BP2P78314 561 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 GRIK2Q13002 908 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PLD1Q13393 1074 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 UGT3A2Q3SY77 523 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 CXorf57Q6NSI4 855 aaKnown RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 CERS6Q6ZMG9 384 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 RNF111Q6ZNA4 994 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ITIH5Q86UX2 942 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 MIER2Q8N344 545 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 KCNJ9Q92806 393 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 TMEM169Q96HH4 297 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 HOPXQ9BPY8 73 aaPredicted RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 FAM50BQ9Y247 325 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PCDHGC4Q9Y5F7 938 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PCDHGA7Q9Y5G6 932 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 DNAJC15Q9Y5T4 150 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 BPTFQ12830 3046 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 E5RI56 91 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PRRG1O14668 218 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 KLK8O60259 260 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 SNX2O60749 519 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 UPP2O95045 317 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 MYCP01106 439 aaPredicted RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 EEF1DP29692 281 aaKnown RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 MAPK8P45983 427 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 CCL23P55773 120 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 AP1S1P61966 158 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 MRPS22P82650 360 aaKnown RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 ARF5P84085 180 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ADGRE1Q14246 886 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 RPS6KA2Q15349 733 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 LRRC36Q1X8D7 754 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 SPATS1Q496A3 300 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ZRANB3Q5FWF4 1079 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 RPS27LQ71UM5 84 aaKnown RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 SPATA19Q7Z5L4 167 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 SPATA24Q86W54 205 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 DDIASQ8IXT1 998 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ST13P4Q8IZP2 240 aaPredicted RBP12.06□□□□□ -0.48
CLN8-212ENST00000637083 CARNMT1Q8N4J0 409 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 PNPLA1Q8N8W4 532 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 TRPC4APQ8TEL6 797 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 TSPEARQ8WU66 669 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 ZNF558Q96NG5 402 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 GPR21Q99679 349 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 HERC2P3Q9BVR0 1158 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 FAM192AQ9GZU8 254 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 EBF3Q9H4W6 596 aa12.06□□□□□ -0.48
CLN8-212ENST00000637083 AKTIPQ9H8T0 292 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms