RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ZSCAN5AQ9BUG6 496 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 KIFC1Q9BW19 673 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 GPR63Q9BZJ6 419 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 DUSP15Q9H1R2 295 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 NEUROG2Q9H2A3 272 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 EPHX3Q9H6B9 360 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 EPB41L5Q9HCM4 733 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ZDHHC18Q9NUE0 388 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 SMOXQ9NWM0 555 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 UBP1Q9NZI7 540 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 IL17CQ9P0M4 197 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 KLF15Q9UIH9 416 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 PLXNB3Q9ULL4 1909 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 KLHL33A6NCF5 533 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 MROH6A6NGR9 719 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PRR5-ARHGAP8B1AHC4 643 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 GPR89AB7ZAQ6 455 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 F8W8V4 182 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PRAMEF26H0Y7S4 382 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 QSOX1O00391 747 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 WNT9AO14904 365 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 KHNYNO15037 678 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PFDN6O15212 129 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 STX7O15400 261 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 MAGEC1O60732 1142 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 NDUFS2O75306 463 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 GJB3O75712 270 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 RPP40O75818 363 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 RHOBTB1O94844 696 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 AGTP01019 485 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 POLBP06746 335 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 HOXC4P09017 264 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 GPR89BP0CG08 455 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 C6P13671 934 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PGAM1P18669 254 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 HNRNPA2B1P22626 353 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 LHCGRP22888 699 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 HNF1BP35680 557 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SPAM1P38567 509 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SPINT3P49223 89 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ZNF140P52738 457 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PCBP4P57723 403 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TAS2R38P59533 333 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 FAM193AP78312 1265 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CSTF1Q05048 431 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TNP2Q05952 138 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 MTM1Q13496 603 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 NAB1Q13506 487 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 HLTFQ14527 1009 aaKnown RBP eCLIP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 IHHQ14623 411 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CNGA3Q16281 694 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CDKN3Q16667 212 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ZNF284Q2VY69 593 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 GPR33Q49SQ1 333 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SPANXN3Q5MJ09 141 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 WDR45BQ5MNZ6 344 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SYCP2LQ5T4T6 812 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TSTD2Q5T7W7 516 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 HENMT1Q5T8I9 393 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ZNF468Q5VIY5 522 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 LYPLAL1Q5VWZ2 237 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PEAR1Q5VY43 1037 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 LRRC66Q68CR7 880 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PMS2CLQ68D20 193 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ESRP1Q6NXG1 681 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 EMBQ6PCB8 327 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 AFTPHQ6ULP2 937 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CRTC1Q6UUV9 634 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ZDHHC24Q6UX98 284 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CERS6Q6ZMG9 384 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 LPCAT2Q7L5N7 544 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 GALNT7Q86SF2 657 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 CAND1Q86VP6 1230 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 DCP2Q8IU60 420 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 MAML2Q8IZL2 1156 aaPredicted RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TTC30BQ8N4P2 665 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TRAM1L1Q8N609 369 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 OR14C36Q8NHC7 312 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 BLOC1S5Q8TDH9 187 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 GANCQ8TET4 914 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 SKA1Q96BD8 255 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 ULK4Q96C45 1275 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 NUS1Q96E22 293 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 STAMBPL1Q96FJ0 436 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 DTD2Q96FN9 168 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TOE1Q96GM8 510 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 COQ10AQ96MF6 247 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 VPS35Q96QK1 796 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TTC1Q99614 292 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 EBNA1BP2Q99848 306 aaKnown RBP6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TPSD1Q9BZJ3 242 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 TRIM31Q9BZY9 425 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 DPH5Q9H2P9 285 aa6.7□□□□□ -1.34
UPF3B-205ENST00000636792 PPCSQ9HAB8 311 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms