RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MAP2K5Q13163 448 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 CYB5D1Q6P9G0 228 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 C17orf64Q86WR6 236 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 OR10Q1Q8NGQ4 319 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 NAT14Q8WUY8 206 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 LCN9Q8WX39 176 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 SRMSQ9H3Y6 488 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 ZDHHC9Q9Y397 364 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 POLR1AO95602 1720 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 PLIN3O60664 434 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 AXLP30530 894 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 TAF10Q12962 218 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 IKBIPQ70UQ0 350 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 AMIGO2Q86SJ2 522 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 DHRSXQ8N5I4 330 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 TSSK3Q96PN8 268 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 TRHDEQ9UKU6 1024 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 C1orf167Q5SNV9 1468 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 C2orf71A6NGG8 1288 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 H3BM21 787 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 CASKO14936 926 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 PGAM2P15259 253 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 ITGA1P56199 1179 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 SWI5Q1ZZU3 235 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 HSDL1Q3SXM5 330 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 KLHL35Q6PF15 583 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 EXOC3L1Q86VI1 746 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 B3GNT5Q9BYG0 378 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 E2F3O00716 465 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 PCDHGA12O60330 932 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 CCKBRP32239 447 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 MXD1Q05195 221 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 ECH1Q13011 328 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 SPIN3Q5JUX0 258 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 TMC3Q7Z5M5 1100 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 WNT8BQ93098 351 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 NPAS2Q99743 824 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 TMBIM4Q9HC24 238 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 CHST7Q9NS84 486 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 ABCC3O15438 1527 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 CCNB2O95067 398 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 CYP1A1P04798 512 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 ALDH3A2P51648 485 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 PLA2G16P53816 162 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 STAG3L4Q8TBR4 150 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 OR51V1Q9H2C8 321 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 SEMA3GQ9NS98 782 aa17.79■□□□□ 0.44
CACNA1A-227ENST00000636549 YDJCA8MPS7 323 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 C1RP00736 705 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 IRAK1P51617 712 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 MAPK14Q16539 360 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 NDUFA9Q16795 377 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 LMX1AQ8TE12 382 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 ITCHQ96J02 903 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 TTPALQ9BTX7 342 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 FRMD8Q9BZ67 464 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 B3GNT4Q9C0J1 378 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 POU2F3Q9UKI9 436 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 CEP152O94986 1710 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 LSM8O95777 96 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 SHMT1P34896 483 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 RPS6KA3P51812 740 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 AKR1D1P51857 326 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 SH3PXD2AQ5TCZ1 1133 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 PRMT9Q6P2P2 845 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 GPRIN3Q6ZVF9 776 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 TSTD1Q8NFU3 115 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 TESCQ96BS2 214 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 L1RE1Q9UN81 338 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 HNRNPH1P31943 449 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 SLC26A3P40879 764 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 GLUD2P49448 558 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 BNIP1Q12981 228 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 FRG1Q14331 258 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 ADHFE1Q8IWW8 467 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 OR4L1Q8NH43 312 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 CXCL11O14625 94 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 LYPLA1O75608 230 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 PEX5LQ8IYB4 626 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 PLEKHG4BQ96PX9 1271 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 ZNF518BQ9C0D4 1074 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 PAGE1O75459 146 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 GDI1P31150 447 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 NR2C2P49116 596 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 FAM131AQ6UXB0 335 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 C11orf65Q8NCR3 313 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 UBE2E3Q969T4 207 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 SEC61A2Q9H9S3 476 aa17.78■□□□□ 0.44
CACNA1A-227ENST00000636549 ZSCAN5BA6NJL1 495 aa17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 CLEC3AO75596 197 aa17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 MT-ND1P03886 318 aa17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 RARRES1P49788 294 aa17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 MSLNQ13421 630 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 UBXN11Q5T124 520 aa17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 ATXN7L2Q5T6C5 722 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 WDR59Q6PJI9 974 aa17.77■□□□□ 0.44
CACNA1A-227ENST00000636549 RP9Q8TA86 221 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms