RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	FBXO47	Q5MNV8	452 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	RFX6	Q8HWS3	928 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	EPHX4	Q8IUS5	362 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	ZNF781	Q8N8C0	355 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	POC5	Q8NA72	575 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	GALNT11	Q8NCW6	608 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	OR7A2P	Q8NGA2	310 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	JOSD2	Q8TAC2	188 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	MAPK15	Q8TD08	544 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	HTRA1	Q92743	480 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	HDAC2	Q92769	488 aa	Known RBP	10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	FAF2	Q96CS3	445 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	FBXL20	Q96IG2	436 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	METTL2A	Q96IZ6	378 aa	Known RBP	10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	TNIP3	Q96KP6	325 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	RRAGC	Q9HB90	399 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	RPRD1B	Q9NQG5	326 aa	Known RBP	10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	DDX28	Q9NUL7	540 aa	Known RBP	10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	WARS2	Q9UGM6	360 aa	Known RBP	10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	CYTH4	Q9UIA0	394 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	PCDHA11	Q9Y5I1	949 aa		10.75	□□□□□ -0.69
CHD2-223	ENST00000636306	C3orf70	A6NLC5	250 aa	Predicted RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	PRKCG	P05129	697 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	JUN	P05412	331 aa	Known RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	GLUL	P15104	373 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	PRKACA	P17612	351 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	HOXA11	P31270	313 aa	Predicted RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	SDC4	P31431	198 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	SLC9A3	P48764	834 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	MLLT6	P55198	1093 aa	Predicted RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	POLD3	Q15054	466 aa	Predicted RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	FSCN1	Q16658	493 aa	Known RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	SPATS1	Q496A3	300 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	ESCO2	Q56NI9	601 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	TBCEL	Q5QJ74	424 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	C9orf57	Q5W0N0	161 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	SEL1L3	Q68CR1	1132 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	DESI1	Q6ICB0	168 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	FAM45BP	Q6NSW5	357 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	DPH6	Q7L8W6	267 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	CAND1	Q86VP6	1230 aa	Known RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	FAM45A	Q8TCE6	357 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	URGCP	Q8TCY9	931 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	DEPDC1B	Q8WUY9	529 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	UBXN10	Q96LJ8	280 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	FTHL17	Q9BXU8	183 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	PCDHAC1	Q9H158	963 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	KCNN2	Q9H2S1	579 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	LIN7B	Q9HAP6	207 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	PLAC1	Q9HBJ0	212 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	WDR6	Q9NNW5	1121 aa	Known RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	HPS4	Q9NQG7	708 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	ADPRHL2	Q9NX46	363 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	USP18	Q9UMW8	372 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	CDYL	Q9Y232	598 aa		10.74	□□□□□ -0.69
CHD2-223	ENST00000636306	GOLGB1	Q14789	3259 aa	Known RBP	10.74	□□□□□ -0.69
CHD2-223	ENST00000636306		A0A1W2PQ72	361 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	C2CD4B	A6NLJ0	364 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	FAM25E	A8MYX2	175 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306		E7ENX8	843 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	TRIM77	I1YAP6	450 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	HUS1	O60921	280 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DUSP11	O75319	330 aa	Known RBP	10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	TRIM16	O95361	564 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	SEC24A	O95486	1093 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	TRUB2	O95900	331 aa	Known RBP	10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	APOA1	P02647	267 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	CAPN1	P07384	714 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	YES1	P07947	543 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	PDGFRA	P16234	1089 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	HTR1B	P28222	390 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	MIP	P30301	263 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	RPS9	P46781	194 aa	Known RBP	10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DEFA1	P59665	94 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DEFA3	P59666	94 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	RALGDS	Q12967	914 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	ORC1	Q13415	861 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	MAPK11	Q15759	364 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	PLA2G4E	Q3MJ16	856 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	XKR4	Q5GH76	650 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	MFSD14C	Q5VZR4	134 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	FAM205BP	Q63HN1	556 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	RGMB	Q6NW40	437 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	C17orf99	Q6UX52	265 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	ALKAL1	Q6UXT8	129 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	FAM183BP	Q6ZVS7	135 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	SNX29P2	Q8IUI4	249 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	CCDC103	Q8IW40	242 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	UBQLNL	Q8IYU4	475 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	TCAIM	Q8N3R3	496 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DCLK2	Q8N568	766 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	CCDC185	Q8N715	623 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	APPL2	Q8NEU8	664 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	OR6B3	Q8NGW1	331 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DYNC2LI1	Q8TCX1	351 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DNAJB3	Q8WWF6	145 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	OMA1	Q96E52	524 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	NPAS2	Q99743	824 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	DSN1	Q9H410	356 aa		10.73	□□□□□ -0.69
CHD2-223	ENST00000636306	NXF3	Q9H4D5	531 aa	Known RBP	10.73	□□□□□ -0.69

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