RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 BEND7Q8N7W2 519 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 CEP112Q8N8E3 955 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 UHMK1Q8TAS1 419 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 ART4Q93070 314 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 TSACCQ96A04 125 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 ZC3H10Q96K80 434 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 UTP11Q9Y3A2 253 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 SNX11Q9Y5W9 270 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 LRP4O75096 1905 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 SPTBN2O15020 2390 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 ARHGEF17Q96PE2 2063 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 TUBB4AP04350 444 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 CFIP05156 583 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 OXTRP30559 389 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 SSTR1P30872 391 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 PNCKQ6P2M8 343 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 RD3Q7Z3Z2 195 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 HCAR2Q8TDS4 363 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 RAB7BQ96AH8 199 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 PDXPQ96GD0 296 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 SPATA16Q9BXB7 569 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 GOLGA4Q13439 2230 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 CCDC162PA2VCL2 907 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 SLC7A4O43246 635 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 PDIA2Q13087 525 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 EFTUD2Q15029 972 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 KIF19Q2TAC6 998 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 ZBED8Q8IZ13 594 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 CLDN19Q8N6F1 224 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 MNS1Q8NEH6 495 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 DNASE2BQ8WZ79 361 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 CFAP36Q96G28 342 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 SEMA4AQ9H3S1 761 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 EIF2B3Q9NR50 452 aaKnown RBP8.48□□□□□ -1.05
CDKL5-209ENST00000635828 TCAF1Q9Y4C2 921 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 PCDH15Q96QU1 1955 aa8.48□□□□□ -1.05
CDKL5-209ENST00000635828 ZCWPW2A0A1B0GU75 182 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 A0A1W2PR77 199 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 VAPBO95292 243 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 PRAMEF1O95521 474 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 GOT2P00505 430 aaKnown RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 ERVK-10P10266 1014 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 HNRNPA2B1P22626 353 aaKnown RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 TGM1P22735 817 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 GMPRP36959 345 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 MPLP40238 635 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 VSNL1P62760 191 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 B4GALNT1Q00973 533 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 TAF1AQ15573 450 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 CCDC70Q6NSX1 233 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 DENND6AQ8IWF6 608 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FBXO36Q8NEA4 188 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 CADM4Q8NFZ8 388 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 SEC14L1Q92503 715 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 CDKN2AIPNLQ96HQ2 116 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FAM8A1Q9UBU6 413 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FEZ2Q9UHY8 353 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FAM187AA6NFU0 413 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 IQCF5A8MTL0 148 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 BCAT2O15382 392 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 THEGLP0DJG4 465 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 CYP2A6P11509 494 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 CD27P26842 260 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 MC4RP32245 332 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 E2F5Q15329 346 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 PLA2G4EQ3MJ16 856 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 KIAA1161Q6NSJ0 714 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 LILRA3Q8N6C8 439 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 LRRC45Q96CN5 670 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FAM126AQ9BYI3 521 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FAM83DQ9H4H8 585 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 FGF22Q9HCT0 170 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 SMYD2Q9NRG4 433 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 TREX1Q9NSU2 369 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 TEX264Q9Y6I9 313 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 LNP1A1A4G5 178 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 STX7O15400 261 aaKnown RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 LPOP22079 712 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 CA4P22748 312 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 GPX6P59796 221 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 RPL26P61254 145 aaKnown RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 BNIP3Q12983 259 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 C1orf61Q13536 156 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 SLC14A2Q15849 920 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 HIF1AQ16665 826 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 TSTD2Q5T7W7 516 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 ZNF669Q96BR6 464 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 NRTNQ99748 197 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 SAYSD1Q9NPB0 183 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 UCKL1Q9NWZ5 548 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 RPL26L1Q9UNX3 145 aaKnown RBP8.47□□□□□ -1.05
CDKL5-209ENST00000635828 PRSS21Q9Y6M0 314 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 RPS6KL1Q9Y6S9 549 aa8.47□□□□□ -1.05
CDKL5-209ENST00000635828 SRP72O76094 671 aaKnown RBP8.46□□□□□ -1.05
CDKL5-209ENST00000635828 SLU7O95391 586 aaKnown RBP8.46□□□□□ -1.05
CDKL5-209ENST00000635828 GPR1P46091 355 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 ARCN1P48444 511 aaKnown RBP8.46□□□□□ -1.05
CDKL5-209ENST00000635828 CDK3Q00526 305 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms