RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LUZP4Q9P127 313 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 IL36RNQ9UBH0 155 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HDAC6Q9UBN7 1215 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 RCOR1Q9UKL0 485 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HSF4Q9ULV5 492 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CAMK2AQ9UQM7 478 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 OSGIN2Q9Y236 505 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GPR52Q9Y2T5 361 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM96BQ9Y3D0 163 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MYH6P13533 1939 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNFX1Q9P2E3 1918 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PARP14Q460N5 1801 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SLIT2O94813 1529 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PIK3C2GO75747 1445 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 DCCP43146 1447 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ARHGAP31Q2M1Z3 1444 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ANKRD50Q9ULJ7 1429 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NAV1Q8NEY1 1877 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 COL4A4P53420 1690 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF831Q5JPB2 1677 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PTPRSQ13332 1948 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 LOXHD1Q8IVV2 1947 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 MYH4Q9Y623 1939 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 COL5A2P05997 1499 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 COL11A1P12107 1806 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 FOCADQ5VW36 1801 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KIAA1671Q9BY89 1806 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 METP08581 1390 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DHX29Q7Z478 1369 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 JCADQ9P266 1359 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PLEKHG1Q9ULL1 1385 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DDX60LQ5H9U9 1706 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 A0A1B0GVM2 712 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 A0A1W2PNU3 283 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PLEKHD1A6NEE1 506 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TTC36A6NLP5 189 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 LRRC53A6NM62 1247 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 EIF3CLB5ME19 914 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 AKR1B15C9JRZ8 316 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KLRF2D3W0D1 207 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CLGNO14967 610 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 EXTL3O43909 919 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TACC1O75410 805 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 EIF3JO75822 258 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 VNN2O95498 520 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CH25HO95992 272 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CNPP09543 421 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 IRF1P10914 325 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CTPS1P17812 591 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF10P21506 573 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 MYF6P23409 242 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 FMO4P31512 558 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PSMC2P35998 433 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PIGAP37287 484 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GPD2P43304 727 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 AMTP48728 403 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GNAQP50148 359 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 RASSF2P50749 326 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KRTAP12-2P59991 146 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 UFM1P61960 85 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TUBA1BP68363 451 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CHRNDQ07001 517 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GALNT2Q10471 571 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TRAF3Q13114 568 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 HNF4GQ14541 408 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 LPIN1Q14693 890 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 RBBP5Q15291 538 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DUSP6Q16828 381 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF284Q2VY69 593 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 MAP3K21Q5TCX8 1036 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SERTAD4-AS1Q5TG53 156 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PLEKHA7Q6IQ23 1121 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 KLHL24Q6TFL4 600 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DEFB132Q7Z7B7 95 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TRIM74Q86UV6 250 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TRIM73Q86UV7 250 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 LRRTM4Q86VH4 590 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ZC3HC1Q86WB0 502 aaKnown RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 HEATR4Q86WZ0 1026 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DENND6AQ8IWF6 608 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC13Q8IYE1 715 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ZDHHC23Q8IYP9 409 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 DSELQ8IZU8 1212 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 RBFAQ8N0V3 343 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SPAG16Q8N0X2 631 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 CNTROBQ8N137 903 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ESX1Q8N693 406 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 WDSUB1Q8N9V3 476 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 GJC3Q8NFK1 279 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 ARRDC2Q8TBH0 407 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 BICD2Q8TD16 824 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 LRRC8CQ8TDW0 803 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 HDAC7Q8WUI4 952 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 RAB40AQ8WXH6 277 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 PPM1EQ8WY54 764 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 TRIB2Q92519 343 aa1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 USP13Q92995 863 aaPredicted RBP1.13□□□□□ -2.23
SMARCB1-209ENST00000635578 SMARCE1Q969G3 411 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms