RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 WNT9AO14904 365 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 RIPK2O43353 540 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 TM7SF2O76062 418 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 RECQL5O94762 991 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 POLBP06746 335 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 SPINT3P49223 89 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 SEC24CP53992 1094 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 PTPN5P54829 565 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 SGCGQ13326 291 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 NUMA1Q14980 2115 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 ANKRD20A4Q4UJ75 823 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 ESRP1Q6NXG1 681 aaKnown RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 NEK5Q6P3R8 708 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 RFLNAQ6ZTI6 216 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 CCDC121Q6ZUS5 278 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 PIGWQ7Z7B1 504 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 WDR5BQ86VZ2 330 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 LONP2Q86WA8 852 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 HORMAD1Q86X24 394 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 CCNJLQ8IV13 435 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 PALM2Q8IXS6 379 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 DEFB119Q8N690 84 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 ATOH1Q92858 354 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 MFSD3Q96ES6 412 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 SEC16BQ96JE7 1060 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 COQ10AQ96MF6 247 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 PHOX2BQ99453 314 aa14.4□□□□□ -0.1
LINC00339-208ENST00000634934 C6orf106Q9H6K1 298 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 NLE1Q9NVX2 485 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 ZFR2Q9UPR6 939 aaKnown RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.4□□□□□ -0.1
LINC00339-208ENST00000634934 RASSF9O75901 435 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 BPIP17213 487 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 HADHAP40939 763 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 RPL6Q02878 288 aaKnown RBP14.39□□□□□ -0.11
LINC00339-208ENST00000634934 CBLBQ13191 982 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 SMAD1Q15797 465 aaKnown RBP14.39□□□□□ -0.11
LINC00339-208ENST00000634934 ARMC3Q5W041 872 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 TTC19Q6DKK2 380 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-208ENST00000634934 UNC5AQ6ZN44 842 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 CBARPQ8N350 705 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-208ENST00000634934 OR13J1Q8NGT2 312 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 ZBTB9Q96C00 473 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 FCRL3Q96P31 734 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-208ENST00000634934 SLC17A9Q9BYT1 436 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 FKBPLQ9UIM3 349 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 MBD1Q9UIS9 605 aaPredicted RBP14.39□□□□□ -0.11
LINC00339-208ENST00000634934 ACTL7BQ9Y614 415 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 FANCMQ8IYD8 2048 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 WDR87Q6ZQQ6 2873 aa14.39□□□□□ -0.11
LINC00339-208ENST00000634934 FRYLO94915 3013 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SLC31A1O15431 190 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 RGS16O15492 202 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 RPP40O75818 363 aaKnown RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 DNAJC8O75937 253 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 USP1O94782 785 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TTC4O95801 387 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 PAK4O96013 591 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 GM2AP17900 193 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 PAMP19021 973 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 HNRNPH1P31943 449 aaKnown RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SPAM1P38567 509 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 ARSDP51689 593 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 PRAMEP78395 509 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SRSF5Q13243 272 aaKnown RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 CRYMQ14894 314 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 KYNUQ16719 465 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 ZNF284Q2VY69 593 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 ZNF528Q3MIS6 628 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TMEM259Q4ZIN3 620 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 KIAA0895LQ68EN5 471 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 FAM151BQ6UXP7 276 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SLC36A4Q6YBV0 504 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TECPR1Q7Z6L1 1165 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TMEM135Q86UB9 458 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TRIM69Q86WT6 500 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 GPR26Q8NDV2 337 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 OR6P1Q8NGX9 317 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SNX19Q92543 992 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 NELL1Q92832 810 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SCAMP4Q969E2 229 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 NUS1Q96E22 293 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 DTD2Q96FN9 168 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TBATAQ96M53 351 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 PLCD4Q9BRC7 762 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 C1QTNF2Q9BXJ5 285 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 CDC42EP4Q9H3Q1 356 aaKnown RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 FAM83DQ9H4H8 585 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 SUDS3Q9H7L9 328 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 YY1AP1Q9H869 796 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 VPS37BQ9H9H4 285 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 PPANQ9NQ55 473 aaKnown RBP14.38□□□□□ -0.11
LINC00339-208ENST00000634934 RAD18Q9NS91 495 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 TREX1Q9NSU2 369 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 NINJ2Q9NZG7 142 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 RIMKLBQ9ULI2 386 aa14.38□□□□□ -0.11
LINC00339-208ENST00000634934 RGSL1A5PLK6 1076 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms