RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 CNTNAP1P78357 1384 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 RFXANKO14593 260 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 FKBP6O75344 327 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 ERCC1P07992 297 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 RPL22P35268 128 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 RARRES1P49788 294 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 ARF3P61204 181 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 ARF1P84077 181 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 TRAP1Q12931 704 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 C4orf46Q504U0 113 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 RNF19BQ6ZMZ0 732 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 MOB2Q70IA6 237 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC24A5Q71RS6 500 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC29A4Q7RTT9 530 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 DGLUCYQ7Z3D6 616 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 GKN2Q86XP6 184 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 TMEM156Q8N614 296 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 ZNF611Q8N823 705 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 TMEM145Q8NBT3 493 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 OR6Y1Q8NGX8 325 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 BCO2Q9BYV7 579 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 LEF1Q9UJU2 399 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 RIIAD1A6NNX1 92 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 TP73O15350 636 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 TM7SF2O76062 418 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 PPIBP23284 216 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SHMT1P34896 483 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SPAM1P38567 509 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 BRCC3P46736 316 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 BDH1Q02338 343 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 HSF2Q03933 536 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 PCDH1Q08174 1060 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC9B1Q4ZJI4 515 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 PTCHD4Q6ZW05 846 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 PLPPR4Q7Z2D5 763 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 GPR180Q86V85 440 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 ZBTB2Q8N680 514 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 DEFB119Q8N690 84 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 PIK3C3Q8NEB9 887 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 RELTQ969Z4 430 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 NDC1Q9BTX1 674 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SEMA6AQ9H2E6 1030 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 DNAJC5Q9H3Z4 198 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 SMURF1Q9HCE7 757 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 KCTD5Q9NXV2 234 aa6.41□□□□□ -1.38
SRGAP1-207ENST00000631006 NEMP2A6NFY4 417 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 PGRMC2O15173 223 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 LGR5O75473 907 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 CDK14O94921 469 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 CLPTM1O96005 669 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 APOC1P02654 83 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 FGF1P05230 155 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ATP4AP20648 1035 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 RFX4Q33E94 735 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 RFTN2Q52LD8 501 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 THOC7Q6I9Y2 204 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 MON1AQ86VX9 555 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 REXO1L1PQ8IX06 675 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 DHRSXQ8N5I4 330 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 TOP6BLQ8N6T0 577 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 COQ8BQ96D53 544 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 DGCR6LQ9BY27 220 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ARHGEF4Q9NR80 690 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 POU2F3Q9UKI9 436 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 PCDHGC3Q9UN70 934 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 FRMPD4Q14CM0 1322 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 A0A075B6Q4 140 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 A0A0A0MRY4 1105 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 NPEPPSL1A6NEC2 478 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 CCDC182A6NF36 153 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 SUV39H1O43463 412 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 CDC40O60508 579 aaKnown RBP eCLIP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 TRBC1P01850 177 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 GYPCP04921 128 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 MTHFD1P11586 935 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 CCT3P49368 545 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 MAPK10P53779 464 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC12A3P55017 1021 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ANTXR2P58335 489 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 TMPRSS11AQ6ZMR5 421 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 PPTC7Q8NI37 304 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ZNF398Q8TD17 642 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 GDPD5Q8WTR4 605 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 PIH1D2Q8WWB5 315 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 EXOSC8Q96B26 276 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 MARK4Q96L34 752 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 SPATA13Q96N96 652 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 CHID1Q9BWS9 393 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ATG10Q9H0Y0 220 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 FAM234BA2RU67 622 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 C1RP00736 705 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ITGAVP06756 1048 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 ENPP7Q6UWV6 458 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 SNX32Q86XE0 403 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 UPF1Q92900 1129 aaKnown RBP eCLIP6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC47A1Q96FL8 570 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 TBC1D10AQ9BXI6 508 aa6.4□□□□□ -1.38
SRGAP1-207ENST00000631006 COMMD4Q9H0A8 199 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms