RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PTPRDP23468 1912 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 C16orf96A6NNT2 1141 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 GP5P40197 560 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 CST6Q15828 149 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 AARS2Q5JTZ9 985 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 ARTNQ5T4W7 220 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 CYS1Q717R9 158 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 CFAP61Q8NHU2 1237 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 ACMSDQ8TDX5 336 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 INPP5DQ92835 1189 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 SYNDIG1Q9H7V2 258 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 LATS2Q9NRM7 1088 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 SYBUQ9NX95 663 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 APOBEC2Q9Y235 224 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 PLLPQ9Y342 182 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 NPC1O15118 1278 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 DCXO43602 365 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 MSH3P20585 1137 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 IRX4P78413 519 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 CYTH1Q15438 398 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 TXNDC11Q6PKC3 985 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 UNC5BQ8IZJ1 945 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 OR52K2Q8NGK3 314 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 AP2M1Q96CW1 435 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 SIRPGQ9P1W8 387 aa12.43□□□□□ -0.42
SYNGAP1-207ENST00000628646 UPK3BL1B0FP48 263 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 UPK3BL2E5RIL1 263 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TRIM16O95361 564 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ITGB6P18564 788 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MRPS21P82921 87 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 NIPAL4Q0D2K0 466 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 GRTP1Q5TC63 336 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ZNF470Q6ECI4 717 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 KIRREL3Q8IZU9 778 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 RLN3Q8WXF3 142 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 HDAC10Q969S8 669 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ASB2Q96Q27 587 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 CEP44Q9C0F1 390 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 INTS6Q9UL03 887 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MYOFQ9NZM1 2061 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 WFS1O76024 890 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 HSPA4LO95757 839 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ADH1BP00325 375 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 LRRC8BQ6P9F7 803 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TRIM67Q6ZTA4 783 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MTDHQ86UE4 582 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TRAPPC5Q8IUR0 188 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 OR2T3Q8NH03 318 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ELMO2Q96JJ3 720 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TRPV4Q9HBA0 871 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 EIF2B3Q9NR50 452 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MARK1Q9P0L2 795 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ALPK3Q96L96 1907 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 GIPC1O14908 333 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MMP20O60882 483 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 SRP72O76094 671 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TOP3BO95985 862 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 POU3F3P20264 500 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 BGNP21810 368 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 OPRD1P41143 372 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 EIF2DP41214 584 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TNFRSF4P43489 277 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 CCNG1P51959 295 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 NSUN2Q08J23 767 aaKnown RBP eCLIP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ZNF805Q5CZA5 627 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MANEALQ5VSG8 457 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 POTEHQ6S545 545 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ERN2Q76MJ5 926 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 PFDN4Q9NQP4 134 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 NKX1-2Q9UD57 310 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ANKRD66B4E2M5 251 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 PCCBP05166 539 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 SERPINB4P48594 390 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 SERPINB8P50452 374 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TTC23LQ6PF05 361 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 CNTD1Q8N815 330 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 MECRQ9BV79 373 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 GPR174Q9BXC1 333 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TBC1D10AQ9BXI6 508 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 FAM83DQ9H4H8 585 aa12.42□□□□□ -0.42
SYNGAP1-207ENST00000628646 TM7SF2O76062 418 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 RHOBTB1O94844 696 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 SLC25A14O95258 325 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 USP10Q14694 798 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 FAM91A1Q658Y4 838 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 KYAT3Q6YP21 454 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 TIFABQ6ZNK6 161 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 RAB44Q7Z6P3 723 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 KCNMB4Q86W47 210 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 ARMC2Q8NEN0 867 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 TSPAN17Q96FV3 270 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 MSANTD3Q96H12 275 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms