RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TMC3Q7Z5M5 1100 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 CDKL3Q8IVW4 592 aaPredicted RBP22.23■■□□□ 1.15
SF1-220ENST00000626028 ACTL9Q8TC94 416 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 RIOK2Q9BVS4 552 aaKnown RBP22.23■■□□□ 1.15
SF1-220ENST00000626028 RMI1Q9H9A7 625 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 HACD3Q9P035 362 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 MOSPD1Q9UJG1 213 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 SUFUQ9UMX1 484 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 ZNF106Q9H2Y7 1883 aaKnown RBP22.23■■□□□ 1.15
SF1-220ENST00000626028 URB1O60287 2271 aaKnown RBP22.23■■□□□ 1.15
SF1-220ENST00000626028 A0A0U1RQS6 177 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 GOLGA6L9A6NEM1 432 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 H7C0C1 242 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 ARHGAP6O43182 974 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 KRT86O43790 486 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 PMPCBO75439 489 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 ANXA9O76027 345 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 STK10O94804 968 aaKnown RBP22.22■■□□□ 1.15
SF1-220ENST00000626028 PYGMP11217 842 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 MYF5P13349 255 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 GLB1P16278 677 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 NFKB1P19838 968 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 ATP5OP48047 213 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 OTUD4Q01804 1114 aaKnown RBP22.22■■□□□ 1.15
SF1-220ENST00000626028 LRP8Q14114 963 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 B4GALNT4Q76KP1 1039 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 KYQ8NBH2 561 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 FAM46DQ8NEK8 389 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 WDR24Q96S15 920 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 DESI2Q9BSY9 194 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 ZSCAN5AQ9BUG6 496 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.22■■□□□ 1.158e-10■■■□□ 18.4
SF1-220ENST00000626028 APPL1Q9UKG1 709 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 ZNF711Q9Y462 761 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 ADGRG1Q9Y653 693 aa22.22■■□□□ 1.15
SF1-220ENST00000626028 GPR89AB7ZAQ6 455 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 GPR89BP0CG08 455 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 HLA-DPA1P20036 260 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 WNT3AP56704 352 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 ZDHHC20Q5W0Z9 365 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 KDELC1Q6UW63 502 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 NYAP1Q6ZVC0 841 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 DTX3LQ8TDB6 740 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 HES6Q96HZ4 224 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 GPR63Q9BZJ6 419 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 GBA3Q9H227 469 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 GULP1Q9UBP9 304 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 PKD1L2Q7Z442 2459 aa22.21■■□□□ 1.15
SF1-220ENST00000626028 SRRM3A6NNA2 597 aaPredicted RBP22.2■■□□□ 1.14
SF1-220ENST00000626028 NUDT21O43809 227 aaKnown RBP22.2■■□□□ 1.14
SF1-220ENST00000626028 FUCA1P04066 466 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 RBP3P10745 1247 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 RBL1P28749 1068 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 HMGCLP35914 325 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 GNPDA1P46926 289 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 EIF3EP60228 445 aaKnown RBP22.2■■□□□ 1.14
SF1-220ENST00000626028 C14orf28Q4W4Y0 310 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 CERCAMQ5T4B2 595 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 RBM44Q6ZP01 1051 aaKnown RBP22.2■■□□□ 1.14
SF1-220ENST00000626028 ZNF662Q6ZS27 426 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 KDELC2Q7Z4H8 507 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 MARCH9Q86YJ5 346 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 EID2BQ96D98 161 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 PLEKHG4BQ96PX9 1271 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 OR2M4Q96R27 311 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 CCDC3Q9BQI4 270 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 DPEP2Q9H4A9 486 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 SIRPGQ9P1W8 387 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 RSPH14Q9UHP6 348 aa22.2■■□□□ 1.14
SF1-220ENST00000626028 AAR2Q9Y312 384 aaKnown RBP22.2■■□□□ 1.14
SF1-220ENST00000626028 DSPP15924 2871 aaKnown RBP22.2■■□□□ 1.14
SF1-220ENST00000626028 KIF26BQ2KJY2 2108 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 ZW10O43264 779 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 NOBOXO60393 691 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 PPFIA2O75334 1257 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 FGF1P05230 155 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 ADCY8P40145 1251 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 GEMP55040 296 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 CLDN6P56747 220 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 CYP4F3Q08477 520 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 SLC1A5Q15758 541 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 PYCR3Q53H96 274 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 PERM1Q5SV97 790 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 C17orf82Q86X59 251 aaPredicted RBP22.19■■□□□ 1.14
SF1-220ENST00000626028 NRROSQ86YC3 692 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 TRAM1L1Q8N609 369 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 MDM1Q8TC05 714 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 MRGPRX2Q96LB1 330 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 AGAP2Q99490 1192 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 HERPUD2Q9BSE4 406 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 FSD1LQ9BXM9 530 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 UBP1Q9NZI7 540 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 TRIM10Q9UDY6 481 aa22.19■■□□□ 1.14
SF1-220ENST00000626028 CNOT6Q9ULM6 557 aaKnown RBP22.19■■□□□ 1.14
SF1-220ENST00000626028 TMX2-CTNND1H3BSU7 103 aa22.18■■□□□ 1.14
SF1-220ENST00000626028 TAF4O00268 1085 aa22.18■■□□□ 1.14
SF1-220ENST00000626028 NTN3O00634 580 aaPredicted RBP22.18■■□□□ 1.14
SF1-220ENST00000626028 CSO75390 466 aaKnown RBP22.18■■□□□ 1.14
SF1-220ENST00000626028 PTMAP06454 111 aaKnown RBP22.18■■□□□ 1.14
SF1-220ENST00000626028 SPIDRQ14159 915 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms