RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZFYVE1Q9HBF4 777 aa10.78□□□□□ -0.68
SSBP4-215ENST00000625926 EPB41L5Q9HCM4 733 aa10.78□□□□□ -0.68
SSBP4-215ENST00000625926 ASCL3Q9NQ33 180 aa10.78□□□□□ -0.68
SSBP4-215ENST00000625926 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
SSBP4-215ENST00000625926 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 RHPN2P1A8MT19 583 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 PLD2O14939 933 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 INPP4BO15327 924 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 CST8O60676 142 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TNFSF15O95150 251 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 ASMTLO95671 621 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 ECEL1O95672 775 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 CCKBRP32239 447 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 ACTR1BP42025 376 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 ZNF75DP51815 510 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 ACTR1AP61163 376 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 B4GALNT1Q00973 533 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TLE3Q04726 772 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 CDK18Q07002 472 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 LRP8Q14114 963 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 GALNT3Q14435 633 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 PRKD1Q15139 912 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 SLC14A2Q15849 920 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TAZQ16635 292 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 PYCR3Q53H96 274 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 FAM182AQ5T1J6 154 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 KAZNQ674X7 775 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 SPOCD1Q6ZMY3 1216 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 B4GALNT4Q76KP1 1039 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 MARK2Q7KZI7 788 aaKnown RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 RAB11FIP2Q7L804 512 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 KDELC2Q7Z4H8 507 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 SPRED1Q7Z699 444 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 B3GNT8Q7Z7M8 397 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TRIM74Q86UV6 250 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 GALNT13Q8IUC8 556 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 KATNAL2Q8IYT4 538 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 FBXO39Q8N4B4 442 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TFB1MQ8WVM0 346 aaKnown RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 KCNE4Q8WWG9 221 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 P3H4Q92791 437 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 CCDC97Q96F63 343 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 PRR11Q96HE9 360 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 NAF1Q96HR8 494 aaKnown RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TEKT5Q96M29 485 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 TRIB3Q96RU7 358 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 WDR24Q96S15 920 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 DPH1Q9BZG8 443 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 FOXP3Q9BZS1 431 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 PRORYQ9H606 182 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 GLOD4Q9HC38 313 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 MAGEE1Q9HCI5 957 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 RAD18Q9NS91 495 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 VPS18Q9P253 973 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 SAE1Q9UBE0 346 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 ST14Q9Y5Y6 855 aa10.77□□□□□ -0.69
SSBP4-215ENST00000625926 EPN1Q9Y6I3 576 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-215ENST00000625926 PLXNB3Q9ULL4 1909 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 CDRT15L2A8MXV6 281 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 MTSS1O43312 755 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 B4GAT1O43505 415 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 IPO7O95373 1038 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ATP1A1P05023 1023 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ITGA2BP08514 1039 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 PTPN3P26045 913 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ALDH4A1P30038 563 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 MAZP56270 477 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ZFP36L1Q07352 338 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 LLGL1Q15334 1064 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 PCSK7Q16549 785 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 CLPPQ16740 277 aaPredicted RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 TFDP3Q5H9I0 405 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 HENMT1Q5T8I9 393 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 BROXQ5VW32 411 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 C11orf63Q6NUN7 778 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 LYSMD3Q7Z3D4 306 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ZNF438Q7Z4V0 828 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 TMC3Q7Z5M5 1100 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 PIM3Q86V86 326 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 TMTC1Q8IUR5 882 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 CCDC50Q8IVM0 306 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 NAGSQ8N159 534 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 SPATA22Q8NHS9 363 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 TMEM159Q96B96 161 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 TADA1Q96BN2 335 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 RBM41Q96IZ5 413 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 CALR3Q96L12 384 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 PANX2Q96RD6 677 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 SRPK1Q96SB4 655 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 RBSNQ9H1K0 784 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 GOLPH3Q9H4A6 298 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 RMI1Q9H9A7 625 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ZNHIT2Q9UHR6 403 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 ATXN7L1Q9ULK2 861 aaPredicted RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 CNOT6Q9ULM6 557 aaKnown RBP10.76□□□□□ -0.69
SSBP4-215ENST00000625926 TFR2Q9UP52 801 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 SHOC2Q9UQ13 582 aa10.76□□□□□ -0.69
SSBP4-215ENST00000625926 PLEKHM1Q9Y4G2 1056 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms