RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZNF669Q96BR6 464 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 CDKN2AIPNLQ96HQ2 116 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 C9orf72Q96LT7 481 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 FCRL3Q96P31 734 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 C1QTNF7Q9BXJ2 289 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 TXLNGYQ9BZA5 131 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 SMOC1Q9H4F8 434 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 FAM83DQ9H4H8 585 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 IL26Q9NPH9 171 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 PILRBQ9UKJ0 227 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 FAM169AQ9Y6X4 670 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 GON4LQ3T8J9 2241 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 FSBPO95073 299 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 TGM1P22735 817 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 HOXD11P31277 338 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 SPAM1P38567 509 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 ARSDP51689 593 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 DPTQ07507 201 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 CRYMQ14894 314 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 PLA2G2CQ5R387 149 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 HENMT1Q5T8I9 393 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 KIAA0930Q6ICG6 404 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 AENQ8WTP8 325 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 SNX19Q92543 992 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 BIRC7Q96CA5 298 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 NUS1Q96E22 293 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 TBATAQ96M53 351 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 ABCG8Q9H221 673 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 SEMA4GQ9NTN9 838 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 FKBPLQ9UIM3 349 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 APPL1Q9UKG1 709 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 CFAP54Q96N23 3096 aa19.75■□□□□ 0.75
PDLIM2-221ENST00000622702 PAK4O96013 591 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 GSTA2P09210 222 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 TSHRP16473 764 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 PAMP19021 973 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 MAT2AP31153 395 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 DPP6P42658 865 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 TMPRSS15P98073 1019 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 XIAPP98170 497 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 FRG1Q14331 258 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 CSRP2Q16527 193 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 SETMARQ53H47 684 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 EMBQ6PCB8 327 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 PALM2Q8IXS6 379 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 DENND6BQ8NEG7 585 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 DNASE2BQ8WZ79 361 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 SCAMP4Q969E2 229 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 HDAC10Q969S8 669 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 AP2M1Q96CW1 435 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 CFAP36Q96G28 342 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 SGSM3Q96HU1 749 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 LENG8Q96PV6 779 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 MIR1-1HGQ9H1L0 117 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 CDC42EP4Q9H3Q1 356 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 CD84Q9UIB8 345 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 DMTF1Q9Y222 760 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 GVINP1Q7Z2Y8 2422 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 DOCK9Q9BZ29 2069 aa19.74■□□□□ 0.75
PDLIM2-221ENST00000622702 GLYATL1P3A0A0U1RQE8 302 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 GOLGA8CPA6NN73 597 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 CCL22O00626 93 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 GAPDHSO14556 408 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 ZNF806P0C7X5 589 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 ARNTP27540 789 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 ARCN1P48444 511 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 PRAMEP78395 509 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 PEX6Q13608 980 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 LRRC14Q15048 493 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 WSCD2Q2TBF2 565 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 KIAA2013Q8IYS2 634 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 TP53I13Q8NBR0 393 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 KLK6Q92876 244 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 CENPTQ96BT3 561 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 TTC25Q96NG3 672 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 KLF6Q99612 283 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 RIOK2Q9BVS4 552 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 LRRC4CQ9HCJ2 640 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 NINJ2Q9NZG7 142 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 EIF2B4Q9UI10 523 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 ZNF106Q9H2Y7 1883 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 PLXNA2O75051 1894 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 CCDC162PA2VCL2 907 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 PATE3B3GLJ2 98 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 SLC31A1O15431 190 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 SPAG6O75602 509 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 HOXD12P35452 270 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 GPX6P59796 221 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 SF3A2Q15428 464 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 KYNUQ16719 465 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 PEAR1Q5VY43 1037 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 ALS2CLQ60I27 953 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 AFTPHQ6ULP2 937 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 TRMT10CQ7L0Y3 403 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 TRAM1L1Q8N609 369 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 GSDMBQ8TAX9 411 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 CAVIN3Q969G5 261 aa19.73■□□□□ 0.75
PDLIM2-221ENST00000622702 ZSCAN5AQ9BUG6 496 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms