RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PDZD4Q76G19 769 aaPredicted RBP12.44□□□□□ -0.42
LITAF-221ENST00000622633 CLEC14AQ86T13 490 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 DPP9Q86TI2 863 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 KCNMB4Q86W47 210 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 CADM2Q8N3J6 435 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 OR5H6Q8NGV6 325 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 HDAC2Q92769 488 aaKnown RBP12.44□□□□□ -0.42
LITAF-221ENST00000622633 LENG8Q96PV6 779 aaPredicted RBP12.44□□□□□ -0.42
LITAF-221ENST00000622633 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 DNAI2Q9GZS0 605 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 KLF15Q9UIH9 416 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 ZNF638Q14966 1978 aaKnown RBP12.44□□□□□ -0.42
LITAF-221ENST00000622633 A0A087WXM4 84 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 AIM2O14862 343 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 EPN2O95208 641 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 KCNE1P15382 129 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 NFKB1P19838 968 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 NMBRP28336 390 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 AP2S1P53680 142 aaPredicted RBP12.44□□□□□ -0.42
LITAF-221ENST00000622633 CLCQ05315 142 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 LDLRAP1Q5SW96 308 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 KCTD11Q693B1 232 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 KCTD13Q8WZ19 329 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 DACT3Q96B18 629 aaPredicted RBP12.44□□□□□ -0.42
LITAF-221ENST00000622633 SNX18Q96RF0 628 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 KCNK16Q96T55 309 aa12.44□□□□□ -0.42
LITAF-221ENST00000622633 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 AREL1O15033 823 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 RNASEH2AO75792 299 aaKnown RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 USP17L7P0C7H9 530 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 HOXD8P13378 290 aaPredicted RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 NCAM1P13591 858 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 ZNF26P17031 533 aaPredicted RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 RAB39AQ14964 217 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 SNX17Q15036 470 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 CDK10Q15131 360 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 TAF12Q16514 161 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 GPRIN1Q7Z2K8 1008 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 SIMC1Q8NDZ2 872 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 IFT22Q9H7X7 185 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 COPS7BQ9H9Q2 264 aaPredicted RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 TIGARQ9NQ88 270 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 DDIT4Q9NX09 232 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 FBXW11Q9UKB1 542 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 EIF3LQ9Y262 564 aaKnown RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 TESMINQ9Y4I5 508 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 PLOD2O00469 737 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 PHGDHO43175 533 aaKnown RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 BCL10O95999 233 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 JCHAINP01591 159 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 CD9P21926 228 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 GLDCP23378 1020 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 ARNTP27540 789 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 EPHA3P29320 983 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 KRT20P35900 424 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 AVPR1AP37288 418 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 GLRBP48167 497 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 CLCNKBP51801 687 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 SEMA3BQ13214 749 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 GRM3Q14832 879 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 XKR4Q5GH76 650 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 TOP6BLQ8N6T0 577 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 EDEM1Q92611 657 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 APBA2Q99767 749 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 C17orf62Q9BQA9 187 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 RTKNQ9BST9 563 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 ILKAPQ9H0C8 392 aaPredicted RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 TASP1Q9H6P5 420 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 OXSMQ9NWU1 459 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 SUCOQ9UBS9 1254 aaKnown RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 IPPQ9Y573 584 aa12.43□□□□□ -0.42
LITAF-221ENST00000622633 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
LITAF-221ENST00000622633 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 A0A0X1KG70 313 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 SMIM35A0A1B0GVV1 85 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 NADKO95544 446 aaPredicted RBP12.42□□□□□ -0.42
LITAF-221ENST00000622633 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
LITAF-221ENST00000622633 ATF4P18848 351 aaPredicted RBP12.42□□□□□ -0.42
LITAF-221ENST00000622633 ATF6P18850 670 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 PIK3R1P27986 724 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 CASP3P42574 277 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
LITAF-221ENST00000622633 DAOAP59103 153 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 CDC42EP1Q00587 391 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 PRAMEF19Q5SWL8 479 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 FKBP9P1Q75LS8 142 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 SLC22A16Q86VW1 577 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 ZNF354CQ86Y25 554 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 LHFPL5Q8TAF8 219 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
LITAF-221ENST00000622633 SCYL1Q96KG9 808 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 IL12RB2Q99665 862 aa12.42□□□□□ -0.42
LITAF-221ENST00000622633 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms