RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 IVDP26440 423 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 GPR1P46091 355 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 CCT8P50990 548 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 PTK6Q13882 451 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 POU6F1Q14863 301 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 TPSAB1Q15661 275 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 ALG11Q2TAA5 492 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 CERCAMQ5T4B2 595 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 TRIM74Q86UV6 250 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 RBFAQ8N0V3 343 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 OR4K2Q8NGD2 314 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 OR13C4Q8NGS5 318 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 MRPL40Q9NQ50 206 aaKnown RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 OAS3Q9Y6K5 1087 aaKnown RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 GOLGA4Q13439 2230 aaKnown RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 MROH6A6NGR9 719 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 SLC30A4O14863 429 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 DFNA5O60443 496 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 SDC3O75056 442 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 GAS8O95995 478 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 GIMD1P0DJR0 217 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 LPOP22079 712 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 TERF1P54274 439 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 SLC14A1Q13336 389 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 PTK2BQ14289 1009 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 RSPO4Q2I0M5 234 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 UAP1L1Q3KQV9 507 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 ENPP7Q6UWV6 458 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 GATAD2AQ86YP4 633 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 OXR1Q8N573 874 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 TRAM1L1Q8N609 369 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 WDR92Q96MX6 357 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 FRMD8Q9BZ67 464 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 CDH19Q9H159 772 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 UCKL1Q9NWZ5 548 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 DNAJC28Q9NX36 388 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 DLL3Q9NYJ7 618 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 CDC23Q9UJX2 597 aa14.23□□□□□ -0.13
CBWD3-217ENST00000621474 PCYT1BQ9Y5K3 369 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-217ENST00000621474 COL5A1P20908 1838 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-217ENST00000621474 C2orf81A6NN90 581 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 CACNB4O00305 520 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-217ENST00000621474 CCL22O00626 93 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 INPP4BO15327 924 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 TTI1O43156 1089 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 PIAS2O75928 621 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 CRTAMO95727 393 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 CEACAM5P06731 702 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 PSMA3P25788 255 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 HTR1BP28222 390 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 SPAM1P38567 509 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 LMAN1P49257 510 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 ARRB1P49407 418 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-217ENST00000621474 HK3P52790 923 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 XIAPP98170 497 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 C2orf54Q08AI8 447 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 ATP13A5Q4VNC0 1218 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 CCDC38Q502W7 563 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 FAM151BQ6UXP7 276 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 JAMLQ86YT9 394 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 SLC25A45Q8N413 288 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 NAT8LQ8N9F0 302 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 DNAAF3Q8N9W5 541 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 OR56A4Q8NGH8 313 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 DTX3LQ8TDB6 740 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 OR1E3Q8WZA6 343 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 TSACCQ96A04 125 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-217ENST00000621474 LRRC45Q96CN5 670 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 DNAJC1Q96KC8 554 aaKnown RBP14.22□□□□□ -0.13
CBWD3-217ENST00000621474 ZNF778Q96MU6 729 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 C19orf43Q9BQ61 176 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 ZSCAN5AQ9BUG6 496 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 SPATA16Q9BXB7 569 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 FKBPLQ9UIM3 349 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 BTBD3Q9Y2F9 522 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 PKP3Q9Y446 797 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 PCDHGB2Q9Y5G2 931 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 DGKBQ9Y6T7 804 aa14.22□□□□□ -0.13
CBWD3-217ENST00000621474 TP73O15350 636 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 STX7O15400 261 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 CBFA2T3O75081 653 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PPFIA2O75334 1257 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PYGLP06737 847 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 JUNDP17535 347 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 DGKAP23743 735 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 POLD2P49005 469 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 SRP54P61011 504 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 MRPS25P82663 173 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 CDK16Q00536 496 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 DR1Q01658 176 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PEX6Q13608 980 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PPP1R7Q15435 360 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 KHDC1Q4VXA5 237 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 RNASEH2BQ5TBB1 312 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PPP1R21Q6ZMI0 780 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 CAND1Q86VP6 1230 aaKnown RBP14.21□□□□□ -0.13
CBWD3-217ENST00000621474 PHACTR4Q8IZ21 702 aa14.21□□□□□ -0.13
CBWD3-217ENST00000621474 OR13J1Q8NGT2 312 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms