RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TMEM207Q6UWW9 146 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 Q6ZVU0 165 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 ARHGAP22Q7Z5H3 698 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 PHOSPHO2Q8TCD6 241 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
VTA1-205ENST00000620996 IRF7Q92985 503 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.9□□□□□ -0.82
VTA1-205ENST00000620996 GPR78Q96P69 363 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 GPR21Q99679 349 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 ZFYVE1Q9HBF4 777 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 TAS2R13Q9NYV9 303 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 IRAK3Q9Y616 596 aa9.9□□□□□ -0.82
VTA1-205ENST00000620996 RANBP2P49792 3224 aaKnown RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 IQCF5A8MTL0 148 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 PABPC1P11940 636 aaKnown RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 KCNA5P22460 613 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 ARL1P40616 181 aaPredicted RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 ACVR1Q04771 509 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 SLC9B1Q4ZJI4 515 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 TECRLQ5HYJ1 363 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 SEL1L3Q68CR1 1132 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 PAQR3Q6TCH7 311 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 MAVSQ7Z434 540 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 ADGRD2Q7Z7M1 963 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 ZNF366Q8N895 744 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 SIDT2Q8NBJ9 832 aaKnown RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 OR2AP1Q8NGE2 309 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 ITFG1Q8TB96 612 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 AARSD1Q9BTE6 412 aaKnown RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 HACD3Q9P035 362 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 ZDHHC2Q9UIJ5 367 aa9.9□□□□□ -0.83
VTA1-205ENST00000620996 TRMT6Q9UJA5 497 aaKnown RBP9.9□□□□□ -0.83
VTA1-205ENST00000620996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.89□□□□□ -0.83
VTA1-205ENST00000620996 MOSPD3O75425 235 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 VPS26AO75436 327 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 PRAMEF1O95521 474 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 ANP32DO95626 131 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 FGF19O95750 216 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 EPHA3P29320 983 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 HNF1BP35680 557 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 NRIP1P48552 1158 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 RPL14P50914 215 aaKnown RBP9.89□□□□□ -0.83
VTA1-205ENST00000620996 CAMK1Q14012 370 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 C22orf39Q6P5X5 142 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 RINLQ6ZS11 566 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 TREML1Q86YW5 311 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 FAM217AQ8IXS0 508 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 MARK4Q96L34 752 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 PLEKHG4BQ96PX9 1271 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 TBC1D10AQ9BXI6 508 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 OSBPL1AQ9BXW6 950 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 DRC3Q9H069 523 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 ASB8Q9H765 288 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 SPHK2Q9NRA0 654 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 RNF112Q9ULX5 631 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 LOC100653049A0A140TA62 436 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 A8MT66 165 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 B2RBV5 119 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 UBXN8O00124 270 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 KRT34O76011 436 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 FDXRP22570 491 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 VIPR2P41587 438 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 SKIV2L2P42285 1042 aaKnown RBP9.89□□□□□ -0.83
VTA1-205ENST00000620996 TTPAP49638 278 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 ERFP50548 548 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 RAD51Q06609 339 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 ACAP2Q15057 778 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 PFKFB4Q16877 469 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 MPP7Q5T2T1 576 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 FAM219BQ5XKK7 198 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 PTRHD1Q6GMV3 140 aaKnown RBP9.89□□□□□ -0.83
VTA1-205ENST00000620996 TSPAN33Q86UF1 283 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 LCA5Q86VQ0 697 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 TMEM151AQ8N4L1 468 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 FAM81AQ8TBF8 368 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 PEX13Q92968 403 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 ZFYVE19Q96K21 471 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 LRMDAQ9H2I8 198 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 SAR1AQ9NR31 198 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 UTP6Q9NYH9 597 aaKnown RBP9.89□□□□□ -0.83
VTA1-205ENST00000620996 CRLS1Q9UJA2 301 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 RAP2CQ9Y3L5 183 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 MYOFQ9NZM1 2061 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 CEP290O15078 2479 aa9.89□□□□□ -0.83
VTA1-205ENST00000620996 SPECC1L-ADORA2AF8WAN1 911 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 DCXO43602 365 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 UGT1A6P19224 532 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 POLR2EP19388 210 aaKnown RBP9.88□□□□□ -0.83
VTA1-205ENST00000620996 UGT1A1P22309 533 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 UGT1A4P22310 534 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 CALB2P22676 271 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 DDX6P26196 483 aaKnown RBP eCLIP9.88□□□□□ -0.83
VTA1-205ENST00000620996 PTPN4P29074 926 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 UGT1A3P35503 534 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 UGT1A5P35504 534 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 CDH13P55290 713 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 ECT2LQ008S8 904 aa9.88□□□□□ -0.83
VTA1-205ENST00000620996 PRKAA1Q13131 559 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms