RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ANKDD1BA6NHY2 528 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 FADS2P1A8MWK0 482 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PDPK1O15530 556 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 HMGCRP04035 888 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 THEGLP0DJG4 465 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 DRD4P21917 467 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 AADACL4Q5VUY2 407 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 KIAA0319Q5VV43 1072 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 DSG4Q86SJ6 1040 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RBM23Q86U06 439 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PCDH19Q8TAB3 1148 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 THAP6Q8TBB0 222 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PHF21BQ96EK2 531 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CPNE2Q96FN4 548 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 ELL3Q9HB65 397 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 USP29Q9HBJ7 922 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 SEMA3GQ9NS98 782 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 DNAAF2Q9NVR5 837 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CAPN6Q9Y6Q1 641 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 XYLBO75191 536 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 IFNA21P01568 189 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 NTRK1P04629 796 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CYP1A2P05177 515 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 KLRK1P26718 216 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CTSKP43235 329 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 ASMTP46597 345 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TTPAP49638 278 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PKNOX1P55347 436 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RHOAP61586 193 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PPP3R1P63098 170 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 EFCAB12Q6NXP0 572 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 ZCCHC12Q6PEW1 402 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 SLC34A3Q8N130 599 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 HEXDCQ8WVB3 486 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 DDX1Q92499 740 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TCEAL4Q96EI5 215 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CENPNQ96H22 339 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CLPTM1LQ96KA5 538 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RANBP3Q9H6Z4 567 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 POLR3BQ9NW08 1133 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM260Q9NX78 707 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 DPP3Q9NY33 737 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TNFRSF10AO00220 468 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 KDM4BO94953 1096 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TYMPP19971 482 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 GRK5P34947 590 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 MAGEA8P43361 318 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 AFF1P51825 1210 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PDX1P52945 283 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 MAPK10P53779 464 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PCID2Q5JVF3 399 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 VWA5B1Q5TIE3 1220 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CXorf21Q9HAI6 301 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CREBZFQ9NS37 354 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TRAF6Q9Y4K3 522 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 NEXMIFQ5QGS0 1516 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 M0R036 132 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM127O75204 238 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 B3GAT3O94766 335 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CSN2P05814 226 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 MTHFD1P11586 935 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 GNSP15586 552 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 IGFBP5P24593 272 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 HTR2AP28223 471 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RPL21P46778 160 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 NUMBP49757 651 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 PLEKHN1Q494U1 663 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 GXYLT1Q4G148 440 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CDKL4Q5MAI5 379 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 ATXN7L2Q5T6C5 722 aaPredicted RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RIOX2Q8IUF8 465 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 RBM12BQ8IXT5 1001 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 CFAP206Q8IYR0 622 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 GATAD2BQ8WXI9 593 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM143Q96AN5 459 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 NXPE2Q96DL1 559 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 GIMAP5Q96F15 307 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 EXOC2Q96KP1 924 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 MBOAT7Q96N66 472 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 DNAJC28Q9NX36 388 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.26
COLCA1-205ENST00000620864 N6AMT1Q9Y5N5 214 aa7.15□□□□□ -1.26
COLCA1-205ENST00000620864 TRPM1Q7Z4N2 1603 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 ATMINO43313 823 aaPredicted RBP7.15□□□□□ -1.27
COLCA1-205ENST00000620864 RHOCP08134 193 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 COL6A2P12110 1019 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 CCR1P32246 355 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 SPATS1Q496A3 300 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 TTI2Q6NXR4 508 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 FBXO22Q8NEZ5 403 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 SELENOMQ8WWX9 145 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 UFD1Q92890 307 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 LENG9Q96B70 501 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 SMARCD1Q96GM5 515 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 TUBB1Q9H4B7 451 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 TNFSF13BQ9Y275 285 aa7.15□□□□□ -1.27
COLCA1-205ENST00000620864 RIIAD1A6NNX1 92 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms