RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 HIF1AQ16665 826 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 ATP13A5Q4VNC0 1218 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 PCID2Q5JVF3 399 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 ZNF648Q5T619 568 aaPredicted RBP13.57□□□□□ -0.24
NEK3-210ENST00000620675 RAET1GQ6H3X3 334 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 PNCKQ6P2M8 343 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 CYP2U1Q7Z449 544 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
NEK3-210ENST00000620675 RANBP9Q96S59 729 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 NLE1Q9NVX2 485 aaPredicted RBP13.57□□□□□ -0.24
NEK3-210ENST00000620675 CNOT6Q9ULM6 557 aaKnown RBP13.57□□□□□ -0.24
NEK3-210ENST00000620675 CHMP2BQ9UQN3 213 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 MAD1L1Q9Y6D9 718 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 HEATR9A2RTY3 570 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 SDR42E2A6NKP2 422 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 GOLGA8KD6RF30 607 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 GOLGA8TH3BQL2 631 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 INPP4BO15327 924 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 ARNTP27540 789 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 ELK3P41970 407 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 WDR45BQ5MNZ6 344 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 PPHLN1Q8NEY8 458 aaKnown RBP13.57□□□□□ -0.24
NEK3-210ENST00000620675 ASB12Q8WXK4 309 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 HDAC10Q969S8 669 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 CDKN2AIPNLQ96HQ2 116 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 KIFC1Q9BW19 673 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 SPATA16Q9BXB7 569 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 SEMA4AQ9H3S1 761 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 TREX1Q9NSU2 369 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 SOX13Q9UN79 622 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
NEK3-210ENST00000620675 CCDC162PA2VCL2 907 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 BCAT2O15382 392 aaPredicted RBP13.56□□□□□ -0.24
NEK3-210ENST00000620675 EPN2O95208 641 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 AKT2P31751 481 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 NHLH1Q02575 133 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 DPTQ07507 201 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
NEK3-210ENST00000620675 KHDC1Q4VXA5 237 aaKnown RBP13.56□□□□□ -0.24
NEK3-210ENST00000620675 Q6ZSR6 202 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 PTAR1Q7Z6K3 402 aaPredicted RBP13.56□□□□□ -0.24
NEK3-210ENST00000620675 ABI3BPQ7Z7G0 1075 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 CCDC25Q86WR0 208 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 HEATR4Q86WZ0 1026 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 SYT12Q8IV01 421 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 NRSN1Q8IZ57 195 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 STYXQ8WUJ0 223 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 SRPK1Q96SB4 655 aaKnown RBP13.56□□□□□ -0.24
NEK3-210ENST00000620675 NFU1Q9UMS0 254 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 DMTF1Q9Y222 760 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 TEX264Q9Y6I9 313 aa13.56□□□□□ -0.24
NEK3-210ENST00000620675 OAS3Q9Y6K5 1087 aaKnown RBP13.56□□□□□ -0.24
NEK3-210ENST00000620675 A0A1B0GVT2 93 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 E7ESA3 106 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 SCAMP1O15126 338 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 MTX2O75431 263 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 CD38P28907 300 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 SPAM1P38567 509 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 GPR1P46091 355 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ARL4CP56559 192 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PFN3P60673 137 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 RACK1P63244 317 aaKnown RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 PDE1CQ14123 709 aaPredicted RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 STAT4Q14765 748 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PEAR1Q5VY43 1037 aaPredicted RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 PIANPQ8IYJ0 282 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PDIK1LQ8N165 341 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 BBOF1Q8ND07 529 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PCYT1BQ9Y5K3 369 aaPredicted RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 GLYATL1P3A0A0U1RQE8 302 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ZCWPW2A0A1B0GU75 182 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 FPGTO14772 594 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PRAMEF1O95521 474 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 THEGLP0DJG4 465 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PSMA3P25788 255 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 MC4RP32245 332 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 TRIM23P36406 574 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 MPLP40238 635 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 DCDC1P59894 354 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ACVR1Q04771 509 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 HLTFQ14527 1009 aaKnown RBP eCLIP13.55□□□□□ -0.24
NEK3-210ENST00000620675 SEMA3AQ14563 771 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PSAPL1Q6NUJ1 521 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 CAPN12Q6ZSI9 719 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 ZNF765Q7L2R6 523 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 LDB1Q86U70 411 aaPredicted RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 DENND6BQ8NEG7 585 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms