RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 CPQQ9Y646 472 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 NCAM2O15394 837 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 ZNF682O95780 498 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 HMBSP08397 361 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 NPR3P17342 541 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 SHMT2P34897 504 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 NEK2P51955 445 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 DGKQP52824 942 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 WNT3AP56704 352 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 COPZ1P61923 177 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 NR6A1Q15406 480 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 DGUOKQ16854 277 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 FUNDC1Q8IVP5 155 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 SCN4BQ8IWT1 228 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 FBXO39Q8N4B4 442 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 HASPINQ8TF76 798 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 NUDT8Q8WV74 236 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 TOP1MTQ969P6 601 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 MAGED4Q96JG8 741 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 ASPSCR1Q9BZE9 553 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 MRGBPQ9NV56 204 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 CD274Q9NZQ7 290 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
CYFIP1-211ENST00000619348 NUP214P35658 2090 aaPredicted RBP13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 DYTNA2CJ06 578 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 PFDN6O15212 129 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 RAD51BO15315 384 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 DYNC1LI2O43237 492 aaPredicted RBP13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 RFC2P35250 354 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 CD86P42081 329 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 HLCSP50747 726 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 GEMP55040 296 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 SYT16Q17RD7 645 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 CYBRD1Q53TN4 286 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 CADM3Q8N126 398 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 CALML6Q8TD86 181 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 HSFY1Q96LI6 401 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 CDK15Q96Q40 435 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 KCTD3Q9Y597 815 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 DNAJC15Q9Y5T4 150 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 SLC30A1Q9Y6M5 507 aa13.21□□□□□ -0.3
CYFIP1-211ENST00000619348 H0YJX3 145 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 RASAL1O95294 804 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 GPIP06744 558 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 GRM5P41594 1212 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ARSFP54793 590 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 OR4D2P58180 307 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 SH3BP2P78314 561 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 C1QTNF1Q9BXJ1 281 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 RERGLQ9H628 205 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ZMYM5Q9UJ78 669 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ANGPTL3Q9Y5C1 460 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 AQP9O43315 295 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 NDUFS2O75306 463 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 MBL2P11226 248 aaPredicted RBP13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 DCKP27707 260 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 MAP2K4P45985 399 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 CYP4F2P78329 520 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 CYP4F3Q08477 520 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 SF3B4Q15427 424 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■■■□ 26.7
CYFIP1-211ENST00000619348 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 TTC23Q5W5X9 447 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 AKAP14Q86UN6 197 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 HMGCLL1Q8TB92 370 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 CEP19Q96LK0 163 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 ZNF560Q96MR9 790 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 SP110Q9HB58 689 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 KIF17Q9P2E2 1029 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 TMED5Q9Y3A6 229 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 TCAF1Q9Y4C2 921 aa13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
CYFIP1-211ENST00000619348 A8MV72 311 aaPredicted RBP13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 RGS5O15539 181 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 ACADVLP49748 655 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 CNIH3Q8TBE1 160 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 C17orf50Q8WW18 174 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 TBATAQ96M53 351 aa13.19□□□□□ -0.3
CYFIP1-211ENST00000619348 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms