RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	GPR21	Q99679	349 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CCDC68	Q9H2F9	335 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TMEM161A	Q9NX61	479 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	UBA2	Q9UBT2	640 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	EGFL7	Q9UHF1	273 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	SARDH	Q9UL12	918 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	MED16	Q9Y2X0	877 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	MYO16	Q9Y6X6	1858 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944		A0A1B0GVG6	124 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	C7orf72	A4D263	438 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	NPEPPSL1	A6NEC2	478 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	ECI2	O75521	394 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TIPRL	O75663	272 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	PENK	P01210	267 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	SMIM18	P0DKX4	95 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	ZNF26	P17031	533 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	GRIA3	P42263	894 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TM4SF4	P48230	202 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	MYBPC1	Q00872	1141 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CLC	Q05315	142 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	RING1	Q06587	406 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	PTPRN	Q16849	979 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	MAP7D1	Q3KQU3	841 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	MTX3	Q5HYI7	312 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	C6orf10	Q5SRN2	563 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CWF19L1	Q69YN2	538 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	PIANP	Q8IYJ0	282 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	BBS5	Q8N3I7	341 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	FBXO39	Q8N4B4	442 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	DCBLD1	Q8N8Z6	715 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	STAG3L4	Q8TBR4	150 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	PRPF18	Q99633	342 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	SLC29A1	Q99808	456 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TFB2M	Q9H5Q4	396 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	SCUBE2	Q9NQ36	999 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	MRPL40	Q9NQ50	206 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	NLE1	Q9NVX2	485 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TAS2R13	Q9NYV9	303 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	SEPT3	Q9UH03	358 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	DNMT3L	Q9UJW3	386 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TBC1D30	Q9Y2I9	924 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	BTN3A1	O00481	513 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	KIF3C	O14782	793 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	INSIG1	O15503	277 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	GPR39	O43194	453 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	CLPTM1	O96005	669 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	PRL	P01236	227 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	KLKB1	P03952	638 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	C8B	P07358	591 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	FGF4	P08620	206 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	CAPN3	P20807	821 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	PSMD8	P48556	350 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	SUOX	P51687	545 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	APLP1	P51693	650 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	DIO3	P55073	304 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	RPL26	P61254	145 aa	Known RBP	11.15	□□□□□ -0.62
TP53-223	ENST00000618944	LAMB3	Q13751	1172 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	SAMD4B	Q5PRF9	694 aa	Known RBP	11.15	□□□□□ -0.62
TP53-223	ENST00000618944	ARMC3	Q5W041	872 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	AP1AR	Q63HQ0	302 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	DHFR2	Q86XF0	187 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	TMEM126B	Q8IUX1	230 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	MIER2	Q8N344	545 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	SIDT2	Q8NBJ9	832 aa	Known RBP	11.15	□□□□□ -0.62
TP53-223	ENST00000618944	KIAA1191	Q96A73	305 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	NMD3	Q96D46	503 aa	Known RBP	11.15	□□□□□ -0.62
TP53-223	ENST00000618944	SPATA17	Q96L03	361 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	CIB1	Q99828	191 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	MGME1	Q9BQP7	344 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	MAGEH1	Q9H213	219 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	SARS2	Q9NP81	518 aa	Known RBP	11.15	□□□□□ -0.62
TP53-223	ENST00000618944	POLG2	Q9UHN1	485 aa		11.15	□□□□□ -0.62
TP53-223	ENST00000618944	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.15	□□□□□ -0.62
TP53-223	ENST00000618944		A0A1B0GTW7	788 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	IQCF5	A8MTL0	148 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	NBN	O60934	754 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	NIPSNAP2	O75323	286 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	TFAP2A	P05549	437 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	CKMT2	P17540	419 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	OGN	P20774	298 aa	Known RBP	11.15	□□□□□ -0.63
TP53-223	ENST00000618944	CES1	P23141	567 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	SLC11A2	P49281	568 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	ACADVL	P49748	655 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	ZNF140	P52738	457 aa	Predicted RBP	11.15	□□□□□ -0.63
TP53-223	ENST00000618944	ROR2	Q01974	943 aa	Known RBP	11.15	□□□□□ -0.63
TP53-223	ENST00000618944	RAD51	Q06609	339 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	TRAP1	Q12931	704 aa	Known RBP	11.15	□□□□□ -0.63
TP53-223	ENST00000618944	CYTH1	Q15438	398 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	ZRANB3	Q5FWF4	1079 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	KANK2	Q63ZY3	851 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	PSAPL1	Q6NUJ1	521 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	SPPL2C	Q8IUH8	684 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	MYO1H	Q8N1T3	1032 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	PCYOX1L	Q8NBM8	494 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	RHEBL1	Q8TAI7	183 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.15	□□□□□ -0.63
TP53-223	ENST00000618944	CANT1	Q8WVQ1	401 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.15	□□□□□ -0.63
TP53-223	ENST00000618944	PSKH2	Q96QS6	385 aa		11.15	□□□□□ -0.63
TP53-223	ENST00000618944	ACOX2	Q99424	681 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms