RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CA5BQ9Y2D0 317 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD6Q9Y2G4 727 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TTLL3Q9Y4R7 772 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PCDHB9Q9Y5E1 797 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RAI2Q9Y5P3 530 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ITPR1Q14643 2758 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 KMT2BQ9UMN6 2715 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 AKAP13Q12802 2813 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 A0A1W2PQU0 124 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 IGLON5A6NGN9 336 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 FAM47DPA6NHR8 397 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 C4orf47A7E2U8 309 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 A8MX80 341 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TLR4O00206 839 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PSMD11O00231 422 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 RASGRF2O14827 1237 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 KCNN4O15554 427 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 MTSS1O43312 755 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 GCATO75600 419 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 DNAJC8O75937 253 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 KCNK5O95279 499 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 METTL18O95568 372 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ECEL1O95672 775 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 WNT1P04628 370 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 HOXC4P09017 264 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ALPIP09923 528 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ATXN1LP0C7T5 689 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ZSCAN5DPP0CG00 497 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ALPPL2P10696 532 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TSHRP16473 764 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CTPS1P17812 591 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 LHCGRP22888 699 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PSMB4P28070 264 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SERPINA4P29622 427 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 MAT2AP31153 395 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ADRA1AP35348 466 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 COILP38432 576 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 MMP12P39900 470 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CTSKP43235 329 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CHRNA4P43681 627 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 RABIFP47224 123 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CCT8P50990 548 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 BLKP51451 505 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 GTF2A1P52655 376 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 RPL26P61254 145 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 HNRNPKP61978 463 aaKnown RBP eCLIP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 BCL2L1Q07817 233 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ITKQ08881 620 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 GRIK2Q13002 908 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SGCGQ13326 291 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 MSLNQ13421 630 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SPARCL1Q14515 664 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CNGA3Q16281 694 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CCNG2Q16589 344 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CDKN3Q16667 212 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 QPCTQ16769 361 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 UGP2Q16851 508 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF284Q2VY69 593 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 KRT71Q3SY84 523 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM52BQ4KMG9 183 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PPM1JQ5JR12 505 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD20A2Q5SQ80 823 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TPRG1LQ5T0D9 272 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 FAXCQ5TGI0 409 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD20A1Q5TYW2 823 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD20A3Q5VUR7 823 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 DENND5AQ6IQ26 1287 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ERAP2Q6P179 960 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 DARS2Q6PI48 645 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CCDC137Q6PK04 289 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 LAYNQ6UX15 382 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PIGWQ7Z7B1 504 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PCGF5Q86SE9 256 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TSPAN33Q86UF1 283 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 HORMAD1Q86X24 394 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 JAMLQ86YT9 394 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CDKL3Q8IVW4 592 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 GALNT15Q8N3T1 639 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TAB3Q8N5C8 712 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM145Q8NBT3 493 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 CCDC197Q8NCU1 140 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 OR6C4Q8NGE1 309 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 WDR48Q8TAF3 677 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 EID2BQ96D98 161 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SEC16BQ96JE7 1060 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SERAC1Q96JX3 654 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 MRGPRX2Q96LB1 330 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SLC6A18Q96N87 628 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 SPATA13Q96N96 652 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TTC25Q96NG3 672 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 PPP1R2P1Q96PQ5 205 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 MCCC1Q96RQ3 725 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 ELF4Q99607 663 aaPredicted RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 FERMT1Q9BQL6 677 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM121Q9BTD3 319 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 WRAP53Q9BUR4 548 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 AP1M1Q9BXS5 423 aa5.25□□□□□ -1.57
SHMT1-211ENST00000618902 TDRD1Q9BXT4 1180 aaKnown RBP5.25□□□□□ -1.57
SHMT1-211ENST00000618902 DDX47Q9H0S4 455 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms