RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RAB43Q86YS6 212 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 TRIM59Q8IWR1 403 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 GALNT6Q8NCL4 622 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 DTX3LQ8TDB6 740 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZFPM2Q8WW38 1151 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 SNRNP40Q96DI7 357 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 CCDC34Q96HJ3 373 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 GSDMAQ96QA5 445 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 TBCBQ99426 244 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 SLC38A3Q99624 504 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 C17orf62Q9BQA9 187 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 TRIM55Q9BYV6 548 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CHRNA10Q9GZZ6 450 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ADGRG1Q9Y653 693 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 BUB1BO60566 1050 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 DNAJC6O75061 913 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ONECUT2O95948 504 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PFKFB1P16118 471 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ALDH4A1P30038 563 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 RORAP35398 523 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CAPZBP47756 277 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 BPIFB4P59827 614 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 RPS15P62841 145 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 TAF5Q15542 800 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PTPN20Q4JDL3 420 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PDPK2PQ6A1A2 396 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PPP1R3BQ86XI6 285 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 XYLT1Q86Y38 959 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CCL4L1Q8NHW4 92 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PRR7Q8TB68 274 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 UBE2Q2Q8WVN8 375 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZNF514Q96K75 400 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 TM6SF2Q9BZW4 377 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ING2Q9H160 280 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 GPR83Q9NYM4 423 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 MPP6Q9NZW5 540 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 UBA2Q9UBT2 640 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 FARSAQ9Y285 508 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 ST14Q9Y5Y6 855 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 NCOA6Q14686 2063 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 SPENQ96T58 3664 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 GON4LQ3T8J9 2241 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 A0A1W2PQJ5 194 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 THAP12O43422 761 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 BNIP3LO60238 219 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 TMEM63AO94886 807 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 FUCA1P04066 466 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 ALPPP05187 535 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 COL8A1P27658 744 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 RFC1P35251 1148 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 ADRA1BP35368 520 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 GNPDA1P46926 289 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 PDE1BQ01064 536 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 OTUD4Q01804 1114 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 HHEXQ03014 270 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 ADCY2Q08462 1091 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 NME3Q13232 169 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 IL10RAQ13651 578 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 CNGA3Q16281 694 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 PRR30Q53SZ7 412 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 DCAF17Q5H9S7 520 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 NKAIN2Q5VXU1 208 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 TFAP2DQ7Z6R9 452 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 KCNMB4Q86W47 210 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 ZNF677Q86XU0 584 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 DSELQ8IZU8 1212 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 PPM1KQ8N3J5 372 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 D2HGDHQ8N465 521 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 AOPEPQ8N6M6 819 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 ITLN2Q8WWU7 325 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 ZDHHC12Q96GR4 267 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 LYSMD1Q96S90 227 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 WDR77Q9BQA1 342 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 TIMM29Q9BSF4 260 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 NUDT9Q9BW91 350 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 NLNQ9BYT8 704 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 CATSPERBQ9H7T0 1116 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 RDH14Q9HBH5 336 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 APMAPQ9HDC9 416 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 SLAMF7Q9NQ25 335 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 COPG2Q9UBF2 871 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 BTRCQ9Y297 605 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 COQ6Q9Y2Z9 468 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 A0A1B0GTL3 188 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 MASP2O00187 686 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 PIK3R2O00459 728 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 KCNN4O15554 427 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 BUB1O43683 1085 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 F3P13726 295 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 DCDC1P59894 354 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 RPL26P61254 145 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 ERV3-1Q14264 604 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 MYBPC3Q14896 1274 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 EIF2S3LQ2VIR3 472 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 ATXN7L2Q5T6C5 722 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 CPZQ66K79 652 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 ALG1LQ6GMV1 187 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 NYAP1Q6ZVC0 841 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 TMEM135Q86UB9 458 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 PSTKQ8IV42 348 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms