RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 IFITM3Q01628 133 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 EN1Q05925 392 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 LGALS3BPQ08380 585 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FRG1Q14331 258 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 MFSD10Q14728 455 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PNCKQ6P2M8 343 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TMPRSS11AQ6ZMR5 421 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 AHSA2Q719I0 299 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SULF1Q8IWU6 871 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ADGRF4Q8IZF3 695 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 EID3Q8N140 333 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PIK3C3Q8NEB9 887 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TEKT5Q96M29 485 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 CBWD1Q9BRT8 395 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FAM213AQ9BRX8 229 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 NAT9Q9BTE0 207 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DPCDQ9BVM2 203 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 C1QTNF7Q9BXJ2 289 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 LIN7BQ9HAP6 207 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 GPRC5CQ9NQ84 441 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 RASSF1Q9NS23 344 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SLCO3A1Q9UIG8 710 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF175Q9Y473 711 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PCDHB3Q9Y5E6 796 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 HRH3Q9Y5N1 445 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 A0A0B4J203 849 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 AGAP5A6NIR3 686 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 C9JVG2 144 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 BBOX1O75936 387 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 RASAL1O95294 804 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ECDO95905 644 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 COL6A1P12109 1028 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 BMP2P12643 396 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TALDO1P37837 337 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 CDH13P55290 713 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 KCNC4Q03721 635 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FGFBP1Q14512 234 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF568Q3ZCX4 644 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SETMARQ53H47 684 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 C6orf141Q5SZD1 244 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 INTS11Q5TA45 600 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FAM45BPQ6NSW5 357 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FIP1L1Q6UN15 594 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 NAT8LQ8N9F0 302 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 LHFPL5Q8TAF8 219 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 GATA5Q9BWX5 397 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SPRTNQ9H040 489 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PTPRHQ9HD43 1115 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 CNTN3Q9P232 1028 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TMPRSS11EQ9UL52 423 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SLIT3O75094 1523 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 NID2Q14112 1375 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 E9PAM4 449 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SLC16A4O15374 487 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 APOC3P02656 99 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ITGB3P05106 788 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 GPIP06744 558 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 HDCP19113 662 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DDOSTP39656 456 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 YWHAZP63104 245 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 AQP6Q13520 282 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PDK2Q15119 407 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DDR2Q16832 855 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 MPP7Q5T2T1 576 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 CNSTQ6PJW8 725 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DPP8Q6V1X1 898 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 GDPD3Q7L5L3 318 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ENOSF1Q7L5Y1 443 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 GALNT5Q7Z7M9 940 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 CDKL3Q8IVW4 592 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TBC1D19Q8N5T2 526 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FLAD1Q8NFF5 587 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TAS1R2Q8TE23 839 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DNAJA4Q8WW22 397 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 STON2Q8WXE9 905 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ST8SIA4Q92187 359 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 NKD2Q969F2 451 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF512BQ96KM6 892 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 HDHD2Q9H0R4 259 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DPEP3Q9H4B8 488 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ANKHQ9HCJ1 492 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ABCB9Q9NP78 766 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PRKAG2Q9UGJ0 569 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 LIMD1Q9UGP4 676 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 GMPPBQ9Y5P6 360 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PIPSLA2A3N6 862 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 C9IYK1 514 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 PITPNM1O00562 1244 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 E2F3O00716 465 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 SLC9A3R1O14745 358 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-205ENST00000617647 ATG7O95352 703 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 CST1P01037 141 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 APOC1P02654 83 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 ERVK-10P10266 1014 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 HTR3AP46098 478 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 CASP7P55210 303 aa7.36□□□□□ -1.23
PDE6A-205ENST00000617647 SNX16P57768 344 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms