RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TBC1D10AQ9BXI6 508 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SUV39H2Q9H5I1 410 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GPAMQ9HCL2 828 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 DZANK1Q9NVP4 752 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 MARCOQ9UEW3 520 aaPredicted RBP20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 A0A087X1B8 175 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CAPN8A6NHC0 703 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TGDSO95455 350 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CCDC166P0CW27 439 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GNAZP19086 355 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 POLR2EP19388 210 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PTPN4P29074 926 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 DGKGP49619 791 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TANGO2Q6ICL3 276 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SDCCAG8Q86SQ7 713 aaPredicted RBP20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 LONP2Q86WA8 852 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SFTPA1Q8IWL2 248 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ZNF366Q8N895 744 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 FAM13CQ8NE31 585 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SCYL1Q96KG9 808 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 FAM83CQ9BQN1 747 aa20.55■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ZNF106Q9H2Y7 1883 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 KIF26AQ9ULI4 1882 aaPredicted RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PEX11AO75192 247 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 LMNAP02545 664 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SERPINE1P05121 402 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SLC1A6P48664 564 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TMEM184AQ6ZMB5 413 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ENDOVQ8N8Q3 282 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ZNF557Q8N988 423 aaPredicted RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PPP1R14CQ8TAE6 165 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GRIN3AQ8TCU5 1115 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 NXPE3Q969Y0 559 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 BIRC8Q96P09 236 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TUBGCP5Q96RT8 1024 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 AARSD1Q9BTE6 412 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TRIM55Q9BYV6 548 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CPEB1Q9BZB8 566 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CIPCQ9C0C6 399 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ZFYVE1Q9HBF4 777 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 INTS10Q9NVR2 710 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 THAP1Q9NVV9 213 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 OXSMQ9NWU1 459 aa20.54■□□□□ 0.88
CNTNAP3B-212ENST00000617422 A0A0G2JND7 137 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 UBA6A0AVT1 1052 aaPredicted RBP20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 POP4O95707 220 aaKnown RBP20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 KITP10721 976 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 FMO4P31512 558 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ZRANB3Q5FWF4 1079 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 FAM45BPQ6NSW5 357 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ZYG11AQ6WRX3 759 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 LCA5Q86VQ0 697 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TEX9Q8N6V9 391 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PAF1Q8N7H5 531 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 FAM45AQ8TCE6 357 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 HPS4Q9NQG7 708 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GALPQ9UBC7 116 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PKP3Q9Y446 797 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PRRT4C9JH25 899 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 DLX3O60479 287 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ADH1CP00326 375 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TAF11Q15544 211 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CMPK2Q5EBM0 449 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ANKRD54Q6NXT1 300 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CRTC1Q6UUV9 634 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 NAT14Q8WUY8 206 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SGF29Q96ES7 293 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 LRRC42Q9Y546 428 aa20.53■□□□□ 0.88
CNTNAP3B-212ENST00000617422 ANTXRLA6NF34 631 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 MYL2P10916 166 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 LHCGRP22888 699 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 KCNC1P48547 511 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SUOXP51687 545 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 VITQ6UXI7 678 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 FAM151BQ6UXP7 276 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 RFLNAQ6ZTI6 216 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TTC8Q8TAM2 541 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TSPAN17Q96FV3 270 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GATA5Q9BWX5 397 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TMEM120AQ9BXJ8 343 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PLA2G2FQ9BZM2 168 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TRPV4Q9HBA0 871 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 IL26Q9NPH9 171 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 WASF2Q9Y6W5 498 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 NEMP2A6NFY4 417 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CTSLP07711 333 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 BPIP17213 487 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 CCR10P46092 362 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 DLX2Q07687 328 aaPredicted RBP20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TECRLQ5HYJ1 363 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 KIAA1958Q8N8K9 716 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TIFAQ96CG3 184 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 SCRN2Q96FV2 425 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TSNARE1Q96NA8 513 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 LYSMD1Q96S90 227 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 TCF12Q99081 682 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 PPIL1Q9Y3C6 166 aa20.52■□□□□ 0.88
CNTNAP3B-212ENST00000617422 GOLGA8CPA6NN73 597 aa20.51■□□□□ 0.87
CNTNAP3B-212ENST00000617422 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms