RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 BMFQ96LC9 184 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 ZNF641Q96N77 438 aaPredicted RBP14.87□□□□□ -0.03
UBXN1-218ENST00000616865 KLHL32Q96NJ5 620 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 SUV39H2Q9H5I1 410 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 L2HGDHQ9H9P8 463 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 ASCL3Q9NQ33 180 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 PCDHGC4Q9Y5F7 938 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 A0A1W2PQ67 120 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 POM121BA6NF01 834 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 CAPN8A6NHC0 703 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 H3BM21 787 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 RAD51CO43502 376 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 SOCS5O75159 536 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 METTL18O95568 372 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 MT-CYBP00156 380 aaPredicted RBP14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ADRB3P13945 408 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 NME1P15531 152 aaKnown RBP14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ITGB7P26010 798 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 PTGIRP43119 386 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 RPS21P63220 83 aaKnown RBP14.86□□□□□ -0.03
UBXN1-218ENST00000616865 SKOR1P84550 965 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 RHDQ02161 417 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 MPP3Q13368 585 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 FGL2Q14314 439 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 FZD2Q14332 565 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 TAF1BQ53T94 588 aaPredicted RBP14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ARMC12Q5T9G4 340 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ZCCHC8Q6NZY4 707 aaKnown RBP14.86□□□□□ -0.03
UBXN1-218ENST00000616865 KDELC2Q7Z4H8 507 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 PARGQ86W56 976 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 NDUFAF2Q8N183 169 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 MMGT1Q8N4V1 131 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 IPMKQ8NFU5 416 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 MAPK15Q8TD08 544 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 TRIM51Q9BSJ1 452 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ADGRE3Q9BY15 652 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 RAB17Q9H0T7 212 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ABCG4Q9H172 646 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 ETNK1Q9HBU6 452 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 CPNE5Q9HCH3 593 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 THSD1Q9NS62 852 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 UTP11Q9Y3A2 253 aaKnown RBP14.86□□□□□ -0.03
UBXN1-218ENST00000616865 HS3ST3A1Q9Y663 406 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 CFAP46Q8IYW2 2715 aa14.86□□□□□ -0.03
UBXN1-218ENST00000616865 SPTY2D1-AS1A0A0U1RR47 76 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 EFCAB8A8MWE9 144 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 NDC80O14777 642 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 CPP00450 1065 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 CSF2P04141 144 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 APRTP07741 180 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 MMP2P08253 660 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 NFKBIAP25963 317 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 WNT3AP56704 352 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 POLR2LP62875 67 aaKnown RBP14.85□□□□□ -0.03
UBXN1-218ENST00000616865 MRPS25P82663 173 aaKnown RBP14.85□□□□□ -0.03
UBXN1-218ENST00000616865 SLC14A2Q15849 920 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 ISXQ2M1V0 245 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 IGF2-ASQ6U949 168 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 WBP1Q96G27 269 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 FICDQ9BVA6 458 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 SLC17A9Q9BYT1 436 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 TRIM31Q9BZY9 425 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 LRRC40Q9H9A6 602 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 CHKBQ9Y259 395 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 FADS3Q9Y5Q0 445 aa14.85□□□□□ -0.03
UBXN1-218ENST00000616865 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 RAD51BO15315 384 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 KLK10O43240 276 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 AP1G1O43747 822 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 SLU7O95391 586 aaKnown RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 PAK4O96013 591 aaPredicted RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 RABIFP47224 123 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 CDK18Q07002 472 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 TRAF2Q12933 501 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 SEMA5AQ13591 1074 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 KCTD19Q17RG1 926 aaPredicted RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 GLE1Q53GS7 698 aaKnown RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 C3orf38Q5JPI3 329 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 ARHGAP40Q5TG30 622 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 BRAT1Q6PJG6 821 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 PPP1R21Q6ZMI0 780 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 PARS2Q7L3T8 475 aaKnown RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 PCGF5Q86SE9 256 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 TTC7BQ86TV6 843 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 NOA1Q8NC60 698 aaKnown RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 LPCAT1Q8NF37 534 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 OXNAD1Q96HP4 312 aaPredicted RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 FEM1CQ96JP0 617 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 KLF6Q99612 283 aaPredicted RBP14.84□□□□□ -0.03
UBXN1-218ENST00000616865 TBL1YQ9BQ87 522 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 LRRC1Q9BTT6 524 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 DPH1Q9BZG8 443 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 NCKIPSDQ9NZQ3 722 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 SATB2Q9UPW6 733 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 CSNK1G3Q9Y6M4 447 aa14.84□□□□□ -0.03
UBXN1-218ENST00000616865 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.83□□□□□ -0.04
UBXN1-218ENST00000616865 A0A1W2PNU3 283 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms