RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ALG6Q9Y672 507 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 BZW2Q9Y6E2 419 aaKnown RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 NUP210Q8TEM1 1887 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 H3BRJ5 948 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 EBAG9O00559 213 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CASC3O15234 703 aaKnown RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CST8O60676 142 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SEMA4FO95754 770 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 IGLV3-25P01717 112 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CTSLP07711 333 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ALPIP09923 528 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ECHS1P30084 290 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PRKCIP41743 596 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PRIM2P49643 509 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 GALNT3Q14435 633 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PLK5Q496M5 336 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 BRMS1LQ5PSV4 323 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 C8orf74Q6P047 294 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 C22orf39Q6P5X5 142 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PEX26Q7Z412 305 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PTAR1Q7Z6K3 402 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 TRIM74Q86UV6 250 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SLC41A1Q8IVJ1 513 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 AADATQ8N5Z0 425 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CASKIN2Q8WXE0 1202 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 OR8D1Q8WZ84 308 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 KLHDC7BQ96G42 594 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ALS2CR12Q96Q35 445 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 EDEM2Q9BV94 578 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 FAM107BQ9H098 131 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SEMA4AQ9H3S1 761 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CATSPERBQ9H7T0 1116 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PCDH18Q9HCL0 1135 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 THAP10Q9P2Z0 257 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 MBD1Q9UIS9 605 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 NFU1Q9UMS0 254 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 NCKAP1Q9Y2A7 1128 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 RP1P56715 2156 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ATMQ13315 3056 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CCL22O00626 93 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 GZMAP12544 262 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CHRNA3P32297 505 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 GTF2A1P52655 376 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MRPS21P82921 87 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 DSC2Q02487 901 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 SPARCL1Q14515 664 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 HNRNPA1L2Q32P51 320 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 C9orf64Q5T6V5 341 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PRAMEF13Q5VWM6 474 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 ZNF776Q68DI1 518 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 KCTD16Q68DU8 428 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RNF43Q68DV7 783 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MRPL14Q6P1L8 145 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 STRADAQ7RTN6 431 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MTDHQ86UE4 582 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CPXM2Q8N436 756 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 SPATA22Q8NHS9 363 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 SYN2Q92777 582 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 BIRC7Q96CA5 298 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RMDN1Q96DB5 314 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 SYT11Q9BT88 431 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 UNKQ9C0B0 810 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 ISCUQ9H1K1 167 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 YY1AP1Q9H869 796 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 BPIFA1Q9NP55 256 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RBM22Q9NW64 420 aaKnown RBP eCLIP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 ARHGEF38Q9NXL2 777 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MARK1Q9P0L2 795 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CHKBQ9Y259 395 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 ARID1BQ8NFD5 2236 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 IGHV1OR15-9A0A0B4J2B8 117 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 SPAARA0A1B0GVQ0 90 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 FAM149AA5PLN7 773 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 IGLON5A6NGN9 336 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MUSKO15146 869 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 INPP4BO15327 924 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RFPL3O75679 317 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PROSCO94903 275 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 MT-CYBP00156 380 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PCCBP05166 539 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PECAM1P16284 738 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CD6P30203 668 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 HNRNPH1P31943 449 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 GPC1P35052 558 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PLA2G5P39877 138 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PTPN9P43378 593 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 TNFRSF4P43489 277 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RPS9P46781 194 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 COPAP53621 1224 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RPS14P62263 151 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 GUCY2DQ02846 1103 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 ZRSR2Q15696 482 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CDCP2Q5VXM1 449 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 CPZQ66K79 652 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 GTF2IRD2BQ6EKJ0 949 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RFLNAQ6ZTI6 216 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 TRMT11Q7Z4G4 463 aaKnown RBP4.98□□□□□ -1.61
SYCP1-209ENST00000613524 GTF2IRD2Q86UP8 949 aa4.98□□□□□ -1.61
SYCP1-209ENST00000613524 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms