RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RAI2Q9Y5P3 530 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 PGM3O95394 542 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 ETS2P15036 469 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 HMGA1P17096 107 aaKnown RBP14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 NELFEP18615 380 aaKnown RBP14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SLC7A2P52569 658 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 DIO3P55073 304 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SQLEQ14534 574 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 PDK3Q15120 406 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SLC22A9Q8IVM8 553 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SLC43A3Q8NBI5 491 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 ICA1LQ8NDH6 482 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 CCDC126Q96EE4 140 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 L3HYPDHQ96EM0 354 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 PSKH2Q96QS6 385 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 TDRD1Q9BXT4 1180 aaKnown RBP14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 TLR9Q9NR96 1032 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SEPT3Q9UH03 358 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 RNF112Q9ULX5 631 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 BTN3A1O00481 513 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 CASQ2O14958 399 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 BCAS2O75934 225 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 SNRPB2P08579 225 aaKnown RBP14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 ALPIP09923 528 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 ITGB6P18564 788 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 MC4RP32245 332 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 ZXDBP98169 803 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 ADGRE1Q14246 886 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 ZRANB3Q5FWF4 1079 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 AMIGO2Q86SJ2 522 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 NPAS4Q8IUM7 802 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 RNF217Q8TC41 542 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 LRTOMTQ8WZ04 291 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 FATE1Q969F0 183 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 TEX37Q96LM6 180 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 CNBD2Q96M20 576 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 TM6SF2Q9BZW4 377 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 PLK2Q9NYY3 685 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 ASB3Q9Y575 518 aa14.02□□□□□ -0.16
PCDHGA3-202ENST00000612467 NDUFS3O75489 264 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 CAPN3P20807 821 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 TNK2Q07912 1038 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 EGFL6Q8IUX8 553 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 FAM126BQ8IXS8 530 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 CARNMT1Q8N4J0 409 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 EEF1AKMT1Q8WVE0 214 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 TUBGCP3Q96CW5 907 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 EID2BQ96D98 161 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 NR1H4Q96RI1 486 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 NLE1Q9NVX2 485 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZDHHC7Q9NXF8 308 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 EGFL7Q9UHF1 273 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZNF225Q9UK10 706 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 APPL1Q9UKG1 709 aa14.02□□□□□ -0.17
PCDHGA3-202ENST00000612467 TRIM38O00635 465 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 OR6B1O95007 311 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 UGT1A6P19224 532 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CR2P20023 1033 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLC11A2P49281 568 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 HK3P52790 923 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 INHBCP55103 352 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 TWF1Q12792 350 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 BIRC2Q13490 618 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 GSTA3Q16772 222 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 HABP4Q5JVS0 413 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CTSL3PQ5NE16 218 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 HECTD3Q5T447 861 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CXorf57Q6NSI4 855 aaKnown RBP14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 ANKS3Q6ZW76 656 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CPNE9Q8IYJ1 553 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CLSTN3Q9BQT9 956 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 C1orf50Q9BV19 199 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 MAGEH1Q9H213 219 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 A0A0J9YYE9 177 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 AZIN1O14977 448 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLC22A2O15244 555 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 KDELR3O43731 214 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 NRP2O60462 931 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 TMCC1O94876 653 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CRTAMO95727 393 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 F11P03951 625 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 HGFP14210 728 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 GPX3P22352 226 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CDH4P55283 916 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 POLE2P56282 527 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 ZNF177Q13360 481 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 AAK1Q2M2I8 961 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 TYSND1Q2T9J0 566 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 C6orf10Q5SRN2 563 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 CLYBLQ8N0X4 340 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 FBXO39Q8N4B4 442 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 GABPB2Q8TAK5 448 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 VPS33AQ96AX1 596 aa14.01□□□□□ -0.17
PCDHGA3-202ENST00000612467 SLCO4A1Q96BD0 722 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms