RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ZBTB16Q05516 673 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 NFATC2Q13469 925 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 TMEM52BQ4KMG9 183 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 ZNF789Q5FWF6 425 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 SYT13Q7L8C5 426 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 MTERF4Q7Z6M4 381 aaKnown RBP17.47■□□□□ 0.39
SREK1-216ENST00000612404 FAM124AQ86V42 546 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 ZC3HC1Q86WB0 502 aaKnown RBP17.47■□□□□ 0.39
SREK1-216ENST00000612404 SRRM1Q8IYB3 904 aaKnown RBP17.47■□□□□ 0.39
SREK1-216ENST00000612404 PGBD3Q8N328 593 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.47■□□□□ 0.39
SREK1-216ENST00000612404 SPATA16Q9BXB7 569 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 FAM83DQ9H4H8 585 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 NCKAP1Q9Y2A7 1128 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 BDP1A6H8Y1 2624 aa17.47■□□□□ 0.39
SREK1-216ENST00000612404 WNT9AO14904 365 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 TSPAN6O43657 245 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 LZTS3O60299 673 aaPredicted RBP17.46■□□□□ 0.39
SREK1-216ENST00000612404 GABRG2P18507 467 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 UGT1A6P19224 532 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 UGT1A1P22309 533 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 UGT1A4P22310 534 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 OAS2P29728 719 aaKnown RBP17.46■□□□□ 0.39
SREK1-216ENST00000612404 UGT1A3P35503 534 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 UGT1A5P35504 534 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 LEPRP48357 1165 aaKnown RBP17.46■□□□□ 0.39
SREK1-216ENST00000612404 LIMK2P53671 638 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 GAS6Q14393 721 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 AARS2Q5JTZ9 985 aaKnown RBP17.46■□□□□ 0.39
SREK1-216ENST00000612404 CNSTQ6PJW8 725 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 SNX20Q7Z614 316 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 OR14C36Q8NHC7 312 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 ZNF398Q8TD17 642 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 SCAMP4Q969E2 229 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 TLCD1Q96CP7 247 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 VPS39Q96JC1 886 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 RHOJQ9H4E5 214 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 RAD18Q9NS91 495 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 CRYL1Q9Y2S2 319 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 MUC3AQ02505 3323 aa17.46■□□□□ 0.39
SREK1-216ENST00000612404 ZNF106Q9H2Y7 1883 aaKnown RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 A0A1W2PPM1 405 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 HMX2A2RU54 273 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 PRR23AA6NEV1 266 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 AP1G1O43747 822 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 NDUFS3O75489 264 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 S1PR4O95977 384 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 MT-ND3P03897 115 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 TTPAP49638 278 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 TYSND1Q2T9J0 566 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 TNFAIP8L3Q5GJ75 292 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 TECPR1Q7Z6L1 1165 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 TRABD2AQ86V40 505 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 PJA1Q8NG27 643 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 MZB1Q8WU39 189 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 MTBPQ96DY7 904 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 COQ10AQ96MF6 247 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 C2orf42Q9NWW7 574 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 FAM53CQ9NYF3 392 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 CRLS1Q9UJA2 301 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 MTO1Q9Y2Z2 717 aaKnown RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 RGSL1A5PLK6 1076 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 PFDN6O15212 129 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 RECQL5O94762 991 aaPredicted RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 SAT1P21673 171 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 HPDP32754 393 aaPredicted RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 ZXDAP98168 799 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 SFSWAPQ12872 951 aaKnown RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 ANO7Q6IWH7 933 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 EXOC3L1Q86VI1 746 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 DCLK2Q8N568 766 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 GPATCH11Q8N954 259 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 TCF12Q99081 682 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 KLF6Q99612 283 aaPredicted RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 MCMBPQ9BTE3 642 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 RIOK2Q9BVS4 552 aaKnown RBP17.45■□□□□ 0.38
SREK1-216ENST00000612404 LRRK1Q38SD2 2015 aa17.45■□□□□ 0.38
SREK1-216ENST00000612404 UBA6A0AVT1 1052 aaPredicted RBP17.44■□□□□ 0.38
SREK1-216ENST00000612404 FAM47DPA6NHR8 397 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 NCOR1O75376 2440 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 GM2AP17900 193 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 DCDC1P59894 354 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 NUMA1Q14980 2115 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 ZNF284Q2VY69 593 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 ATP13A5Q4VNC0 1218 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 GALNT7Q86SF2 657 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 KBTBD6Q86V97 674 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 SERPINA9Q86WD7 417 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 NRSN1Q8IZ57 195 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 AP2M1Q96CW1 435 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 NUS1Q96E22 293 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 DTD2Q96FN9 168 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 CDH19Q9H159 772 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 ABCG8Q9H221 673 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 CD93Q9NPY3 652 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 INTS10Q9NVR2 710 aaKnown RBP17.44■□□□□ 0.38
SREK1-216ENST00000612404 SLC39A10Q9ULF5 831 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 IGLON5A6NGN9 336 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 GOLGA8RI6L899 631 aa17.44■□□□□ 0.38
SREK1-216ENST00000612404 PLRG1O43660 514 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms